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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
evm_27.model.AmTr_v1.0_scaffold00149.46 |
| Common Name | AMTR_s00149p00068500, LOC18437430 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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| Family |
NAC |
| Protein Properties |
Length: 359aa MW: 40679.1 Da PI: 6.4283 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm_27.model.AmTr_v1.0_scaffold00149.46 | genome | TAGP | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 175.2 | 1.8e-54 | 6 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkky 68
lppGfrFhPtdeelv +yLk+k+eg k+el evi+e+d+yk++Pw+Lp k + +++ ew+fF++rd+ky
evm_27.model.AmTr_v1.0_scaffold00149.46 6 LPPGFRFHPTDEELVGYYLKRKIEGLKIEL-EVIPEIDLYKFDPWELPdKsFLPKRDMEWFFFCPRDRKY 74
79****************************.99**************96434556788************ PP
NAM 69 atgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++g+r+nrat++gyWkatgkd++++ +++++g kktLvfy+grap g +tdW+mheyrl
evm_27.model.AmTr_v1.0_scaffold00149.46 75 PNGSRTNRATSAGYWKATGKDRKITMCHSSVTGFKKTLVFYRGRAPAGDRTDWIMHEYRL 134
**************************9*******************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0008283 | Biological Process | cell proliferation |
| GO:0071365 | Biological Process | cellular response to auxin stimulus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MGPMSLPPGF RFHPTDEELV GYYLKRKIEG LKIELEVIPE IDLYKFDPWE LPDKSFLPKR 60
DMEWFFFCPR DRKYPNGSRT NRATSAGYWK ATGKDRKITM CHSSVTGFKK TLVFYRGRAP 120
AGDRTDWIMH EYRLSEDLAR GASSVQFQDA FALCRVIKRH DQGQKGPNHQ DEPKTKRTAI 180
PPLTLDVNKP LMEKPLQECR QGRGRIVKNP RKTIKNHILL QPDNPSDISQ SGYAESSRIG 240
SMKEMHSGDV MELPSGFPSP NISDENEITK NDPADHFEDM DCLSLYFKPT LGFGMCGDED 300
MGFQSHELED NIPFSTGISG FEFRNSILSP ICRQASGDGS TGELSSLWQL EDSQVIVI*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-56 | 4 | 165 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-56 | 4 | 165 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-56 | 4 | 165 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-56 | 4 | 165 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-56 | 4 | 165 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 3e-56 | 4 | 165 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 3e-56 | 4 | 165 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 3e-56 | 4 | 165 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 3e-56 | 4 | 165 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 3e-56 | 4 | 165 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 3e-56 | 4 | 165 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 3e-56 | 4 | 165 | 18 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 4e-56 | 4 | 165 | 15 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 4e-56 | 4 | 165 | 15 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Orthologous Group
? help Back to Top |
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Representative plant | OGRP17 | 15 | 800 |
