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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm_27.model.AmTr_v1.0_scaffold00001.280 |
Common Name | AMTR_s00001p00242720, LOC18424335 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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Family |
NAC |
Protein Properties |
Length: 268aa MW: 30746.2 Da PI: 8.2033 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm_27.model.AmTr_v1.0_scaffold00001.280 | genome | TAGP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 150.8 | 6.3e-47 | 7 | 133 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatg 71
pGfrFhPt+ee++ +yLk+ + g++l++ ++i ++d+y+++Pw+Lp+ ++ +e+ewyfF++rd+k+++g
evm_27.model.AmTr_v1.0_scaffold00001.280 7 PGFRFHPTEEEILGFYLKRVALGNSLQF-DIIGTLDLYRHDPWELPALANIGEREWYFFVPRDRKHPNG 74
9**************************9.99***************8888899**************** PP
NAM 72 krknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
r+nr+tk+g+Wkatg+d+++ s + + glkktLvfy+grapkg ktdWvm+eyrl
evm_27.model.AmTr_v1.0_scaffold00001.280 75 GRPNRITKNGFWKATGSDRRIRSGsdPKCVLGLKKTLVFYTGRAPKGCKTDWVMNEYRL 133
**********************964444559**************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MAELELPGFR FHPTEEEILG FYLKRVALGN SLQFDIIGTL DLYRHDPWEL PALANIGERE 60 WYFFVPRDRK HPNGGRPNRI TKNGFWKATG SDRRIRSGSD PKCVLGLKKT LVFYTGRAPK 120 GCKTDWVMNE YRLLESYPVP KKDIVMCKIY RKVTSLKVLE QRAAMEKDKA TPPQSGCVTP 180 AHATPSPSYH EVDTENQANY ARMETSDVKE EAETASTTHE KQEERPRLAE LQMPKLCMDW 240 MHDPAFTQLR SPWGELLLTP YPSLLNF*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-51 | 1 | 155 | 12 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-51 | 1 | 155 | 12 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-51 | 1 | 155 | 12 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-51 | 1 | 155 | 12 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-51 | 1 | 155 | 15 | 171 | NAC domain-containing protein 19 |
3swm_B | 3e-51 | 1 | 155 | 15 | 171 | NAC domain-containing protein 19 |
3swm_C | 3e-51 | 1 | 155 | 15 | 171 | NAC domain-containing protein 19 |
3swm_D | 3e-51 | 1 | 155 | 15 | 171 | NAC domain-containing protein 19 |
3swp_A | 3e-51 | 1 | 155 | 15 | 171 | NAC domain-containing protein 19 |
3swp_B | 3e-51 | 1 | 155 | 15 | 171 | NAC domain-containing protein 19 |
3swp_C | 3e-51 | 1 | 155 | 15 | 171 | NAC domain-containing protein 19 |
3swp_D | 3e-51 | 1 | 155 | 15 | 171 | NAC domain-containing protein 19 |
4dul_A | 2e-51 | 1 | 155 | 12 | 168 | NAC domain-containing protein 19 |
4dul_B | 2e-51 | 1 | 155 | 12 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP17 | 15 | 800 |