PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.supercontig_62.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family | bZIP | ||||||||
Protein Properties | Length: 423aa MW: 45243.9 Da PI: 10.2727 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.4 | 1.8e-14 | 344 | 395 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L + e+ ++ evm.model.supercontig_62.4 344 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKELNQELERKQAEIMEMQ 395 79*************************************9988877777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-12 | 340 | 405 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.703 | 342 | 393 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.9E-14 | 344 | 393 | No hit | No description |
Pfam | PF00170 | 7.8E-12 | 344 | 396 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.31E-10 | 344 | 391 | No hit | No description |
CDD | cd14707 | 1.73E-25 | 344 | 398 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 347 | 362 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 423 aa Download sequence Send to blast |
MNFKNFGDAS SGEGGNLRPV GNLPLARQSS VYSLTLDEFQ NTLGGMGKDF GSMNMDELLK 60 NIWSAEETQA MSSSAGGGGE GGVPGSNLQR QGSLTLPRTL SQKTVDEVWR DLIKESSVGV 120 AAKDVSDGVG GGAGGANMPQ RQQTLGEMTL EEFLVRAGVV REDTQQFGRP NNTGFYGNNT 180 ASLALGYQQQ TQNHGLLGNR APVPNQPSSF GLNVGRIRMS QQQPQQQQQP LFPKQATVAF 240 ASPVHLVNGG QLTSPASRGS IVGIGDPSLN NNLVQVGGLH SGGGIGMVGL GTGGVTVAAG 300 SPGRQISPDV ISKSSADNSS LSPVPYMFGR GRKCSAALEK VVERRQRRMI KNRESAARSR 360 ARKQAYTMEL EAEVAKLKEL NQELERKQAE IMEMQKTQLL DTMNQPWRSK RQCLRRTLTG 420 PW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00038 | PBM | Transfer from AT4G34000 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | evm.model.supercontig_62.4 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021896694.1 | 0.0 | bZIP transcription factor 46-like | ||||
Refseq | XP_021896695.1 | 0.0 | bZIP transcription factor 46-like | ||||
Refseq | XP_021896696.1 | 0.0 | bZIP transcription factor 46-like | ||||
Swissprot | Q9M7Q3 | 1e-125 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A2I4EER7 | 0.0 | A0A2I4EER7_JUGRE; ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
STRING | evm.model.supercontig_62.4 | 0.0 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM734 | 27 | 129 | Representative plant | OGRP3984 | 10 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 1e-100 | abscisic acid responsive elements-binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | evm.model.supercontig_62.4 |