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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_190.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
WOX |
| Protein Properties |
Length: 284aa MW: 31001.2 Da PI: 6.3649 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_190.1 | genome | ASGPB | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 63.4 | 3.4e-20 | 22 | 81 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++tkeq++ Le+l+ + r+psae++++++ +l +++ ++V++WFqN++a++++
evm.model.supercontig_190.1 22 SRWNPTKEQINMLESLYTQgIRTPSAEQIQQITGRLrafgHIEGKNVFYWFQNHKARQRQ 81
7*****************99**************************************96 PP
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| 2 | Wus_type_Homeobox | 113.6 | 1e-36 | 21 | 83 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++RW+Pt+eQi++Le+ly++G+rtP++e+iq+it +L+++G+ie+kNVfyWFQN+kaR+rqkq
evm.model.supercontig_190.1 21 TSRWNPTKEQINMLESLYTQGIRTPSAEQIQQITGRLRAFGHIEGKNVFYWFQNHKARQRQKQ 83
79***********************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008284 | Biological Process | positive regulation of cell proliferation |
| GO:0009942 | Biological Process | longitudinal axis specification |
| GO:0010654 | Biological Process | apical cell fate commitment |
| GO:0048825 | Biological Process | cotyledon development |
| GO:0080167 | Biological Process | response to karrikin |
| GO:0090451 | Biological Process | cotyledon boundary formation |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MEGDNMEVCG TGGGGGGTGS TSRWNPTKEQ INMLESLYTQ GIRTPSAEQI QQITGRLRAF 60
GHIEGKNVFY WFQNHKARQR QKQKQESVAY FSRFLQKTAH SLYPTSSPNV ICRPYCLPHS 120
HDLGLCPNQC PKLLPGGFSM RSSSISDHQK PETPPTSELR GHDFPHQDLN LLLPTHESYN 180
GLPDAIFNSN EHQINDKETL ALFPLQPSGI LQAKSTSGLT WLASAETSNC TPSSSSSETG 240
NGGGVVVDDP DHHGGGGERP FFDFFSAGST DQVCWESRSS MLD*
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