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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
cra_locus_19019_iso_1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
|
Family |
TCP |
Protein Properties |
Length: 290aa MW: 32710.1 Da PI: 10.3862 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
cra_locus_19019_iso_1 | genome | MPGR | - |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 118.5 | 8e-37 | 75 | 218 | 3 | 132 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......... 65
k drhski T++g+R RRvRls+e+ ++fFdLqd LGfdk+skt++WL+q++ ++ikel +
cra_locus_19019_iso_1_len_1151_ver_3 75 EKSDRHSKIITAKGPRNRRVRLSMEIGRKFFDLQDLLGFDKASKTLDWLFQKSHTSIKELIRMknivddddpr 147
589************************************************************7777754444 PP
TCP 66 .....ssssaseceaesssssasnsssg............kaaksaakskksqksaasalnlakesrakarar 121
s+s++ +c + + ++k+++k + ++k+a++++ + + r+kar+r
cra_locus_19019_iso_1_len_1151_ver_3 148 akislSFSDQLSC-E------------NsldllkksttakPKKKKKKKMEATEKKAKENNGVREGLRKKARER 207
3333333333333.2............1222232222222333333355555555555667777888****** PP
TCP 122 arertrekmri 132
arert++k +
cra_locus_19019_iso_1_len_1151_ver_3 208 ARERTKQKLVL 218
*******9866 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MFCFTTNTTG ISLPPQHQLS PYLDHLPSSS SVENLLQYTD LLSHCSLRSN PTISSTTKST 60 NNGDDQGRRK RRKSEKSDRH SKIITAKGPR NRRVRLSMEI GRKFFDLQDL LGFDKASKTL 120 DWLFQKSHTS IKELIRMKNI VDDDDPRAKI SLSFSDQLSC ENSLDLLKKS TTAKPKKKKK 180 KKMEATEKKA KENNGVREGL RKKARERARE RTKQKLVLRK LISISSAEAE AETSSISSSI 240 GSNICGLWCC FDQPNLLITS RESTSSNFSH WDSSSSSLCA FTTADQQEAL
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 173 | 180 | KPKKKKKK |
2 | 175 | 181 | KKKKKKK |
3 | 177 | 188 | KKKKKMEATEKK |