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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
augustus_masked-scaffold10126-abinit-gene-0.0-mRNA-1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
ERF |
| Protein Properties |
Length: 359aa MW: 40004.2 Da PI: 4.5949 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| augustus_masked-scaffold10126-abinit-gene-0.0-mRNA-1 | genome | THGP | View Nucleic Acid |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.6 | 7.3e-19 | 130 | 179 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdp r r +lg++ taeeAa +++a+ kl+g
augustus_masked-scaffold10126-abinit-gene-0.0-mRNA-1 130 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYETAEEAAMVYDNAAIKLRG 179
89*******.**********82....35*************************99 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042991 | Biological Process | transcription factor import into nucleus |
| GO:0048366 | Biological Process | leaf development |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MDQSILCPIK YTEHRNVTKK HTKPHKAVSS DGRKHIEPRV VRISVTDPDA TDSSSDEEQE 60
NYFFLRRQRV RRYVNEINIE TSSKAAVVVS NPRKRPAAES AAASPSRKVR QVNKASSTAA 120
GAAATPNGRK FRGVRQRPWG KWAAEIRDPA RRVRLWLGTY ETAEEAAMVY DNAAIKLRGP 180
DALTNFVTPP PPTRQKPEIN VASVSSCDSG DEFHNLSSPT SVLHYRTQSS EEEEAEPPKQ 240
EPEPVHEPVQ QSSEPQQLVG EDLFQECQGE TSVPDDLGDF FSFDLPCFDD AFNFSAPDPP 300
ILFEPPLLFD EPIPDDIFKD DFGALFGDSF GSTSTSTTMN QGDDYFDDIL FGLDPLVDL
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