 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc03401.1.g00010.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WOX |
| Protein Properties |
Length: 237aa MW: 25305.1 Da PI: 8.4823 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc03401.1.g00010.1.sm.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 65.6 | 7e-21 | 6 | 66 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++t+eql +Lee++++ r+p+a+e+++++++l +++ ++V++WFqN++a+e++
Zpz_sc03401.1.g00010.1.sm.mk 6 STRWCPTPEQLMILEEMYRSgVRTPNAAEIQQITAHLayygRIEGKNVFYWFQNHKARERQ 66
58*****************99**************************************97 PP
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| 2 | Wus_type_Homeobox | 121.2 | 4.1e-39 | 5 | 67 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
++tRW+PtpeQ++iLee+y+sG+rtPn++eiq+ita+L+ yG+ie+kNVfyWFQN+kaRerq+
Zpz_sc03401.1.g00010.1.sm.mk 5 PSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 67
689***********************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MPQTPSTRWC PTPEQLMILE EMYRSGVRTP NAAEIQQITA HLAYYGRIEG KNVFYWFQNH 60
KARERQRLRR RLCARHQQQY ATSGAPPSAA DGSGAAAGVH PSYAATSFIM PQPHHLGYLG 120
QQATTLPVVH HHPAAAAGGG GGGGGNNNKQ IMAAAAAGAY DGGAALYNNT SHQQEEWTME 180
LSNCSASPGS SDDGTMLPPC CRRPLRTLDL FPTKSSTAGL KDECGSSKSS SCSTSTN
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor required to initiate organ founder cells in a lateral domain of shoot meristems. Involved in leaf formation. {ECO:0000269|PubMed:15169755}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AJ536578 | 2e-89 | AJ536578.1 Zea mays mRNA for homeodomain transcription factor (prs gene). |
| GenBank | BT066120 | 2e-89 | BT066120.1 Zea mays full-length cDNA clone ZM_BFb0350F05 mRNA, complete cds. |
| GenBank | EU969087 | 2e-89 | EU969087.1 Zea mays clone 325979 WUSCHEL-related homeobox 3B mRNA, complete cds. |
| GenBank | JX469942 | 2e-89 | JX469942.1 Zea mays subsp. mays clone UT3202 HB-type transcription factor mRNA, partial cds. |
