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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zpz_sc00514.1.g00170.1.am.mk |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
TCP |
| Protein Properties |
Length: 375aa MW: 39176.8 Da PI: 5.6622 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00514.1.g00170.1.am.mk | genome | ZGD | View Nucleic Acid |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 98.9 | 9e-31 | 118 | 209 | 6 | 103 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnss 86
rh ++hTkv+gR+RR+Rl caar+ L++eLG++ d++t+ WLlqq++pa++++tgt++ +a ++ +++ +
Zpz_sc00514.1.g00170.1.am.mk 118 PRHRDRHTKVEGRGRRIRLAEACAARIARLTRELGHKNDGETVRWLLQQSEPAVIAATGTGTVPAIAT-TVDGVLRLP--- 194
69**********************************************************88777333.333333333... PP
TCP 87 sgkaaksaakskksqks 103
++ ++a ++q +
Zpz_sc00514.1.g00170.1.am.mk 195 --SSPPAAVADGDQQPD 209
..222222222222222 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MVQKIIETEQ KSKSRTRPKT GAAKSKQRRR IEEAGARDES ASSPNPISLG VAAPDMGEED 60
VAAIYHAAGN GTAVTDEAVV GIDAMGSSEA HGSLMPKPEP APMEFLGELQ VANPRPAPRH 120
RDRHTKVEGR GRRIRLAEAC AARIARLTRE LGHKNDGETV RWLLQQSEPA VIAATGTGTV 180
PAIATTVDGV LRLPSSPPAA VADGDQQPDP KRRRKLQPTR AAAAGATAPP LTSTPTAYYP 240
VVADPLLQGN GGGAISTSSG LAPASVPTPP PGAIPFLAIP APGPGATIDG KQMMKPTAVW 300
MVPPQAGAGG AANQPTHYWA FPTNPELFSN FQQQAVYDAG QLVDGGESQH QQLEGHQDGE 360
GEEEDIALTE SSSEE
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator. Binds the promoter core sequence 5'-GGNCC-3', especially at sites IIa (5'-GGGCCCAC-3') and IIb (5'-GGTCCCAC-3') (essential for meristematic tissue-specificity expression) of the PCNA gene promoter. {ECO:0000269|PubMed:12000681}. |
| UniProt | Transcription activator. Binds the promoter core sequence 5'-GGNCC-3', especially at sites IIa (5'-GGGCCCAC-3') and IIb (5'-GGTCCCAC-3') (essential for meristematic tissue-specificity expression) of the PCNA gene promoter. {ECO:0000269|PubMed:12000681, ECO:0000269|PubMed:9338963}. |
