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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zpz_sc00115.1.g00470.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WOX |
| Protein Properties |
Length: 263aa MW: 27910.6 Da PI: 7.8916 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zpz_sc00115.1.g00470.1.sm.mk | genome | ZGD | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 63.3 | 3.6e-20 | 16 | 75 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eql +Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a++++
Zpz_sc00115.1.g00470.1.sm.mk 16 TRWCPTPEQLMILEEMYRGgLRTPNASQIQQITAHLaaygRIEGKNVFYWFQNHKARDRQ 75
7*****************99*************************************996 PP
|
| 2 | Wus_type_Homeobox | 118.4 | 3.1e-38 | 16 | 76 | 4 | 64 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
tRW+PtpeQ++iLee+y+ GlrtPn+++iq+ita+L++yG+ie+kNVfyWFQN+kaR+rqk
Zpz_sc00115.1.g00470.1.sm.mk 16 TRWCPTPEQLMILEEMYRGGLRTPNASQIQQITAHLAAYGRIEGKNVFYWFQNHKARDRQK 76
8***********************************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MPSQQGGQQQ LPTGPTRWCP TPEQLMILEE MYRGGLRTPN ASQIQQITAH LAAYGRIEGK 60
NVFYWFQNHK ARDRQKLRRR LCMSHHLLTC AHYYAAAAAH HHGPGFLAPP VTVPVPPPAY 120
GCGAGGVFDQ AAAVAAGPLL APTSPNPAAA AAYGYYYPAT AFAAAPPASR CAGGATTHPS 180
PNQLLNYHQG GGGVAPADAL GRPEYSLGKL DNFGVSAALD NVDFDMVPAG FEVSATPPPA 240
FCRQLKTLDL FPGGLKEEQH DMV
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT040184 | 1e-117 | BT040184.1 Zea mays full-length cDNA clone ZM_BFc0070F13 mRNA, complete cds. |
| GenBank | KJ726946 | 1e-117 | KJ726946.1 Zea mays clone pUT3492 HB transcription factor (HB82) mRNA, partial cds. |
