PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00034.1.g00810.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 525aa    MW: 56150.3 Da    PI: 5.8055
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00034.1.g00810.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY888e-28242299359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   D ++WrKYGqK++kgs++pr+YYrC++  +C+++k+ve+++ dp +++ tY+geH h+
  Zpz_sc00034.1.g00810.1.am.mk 242 DLWAWRKYGQKPIKGSPYPRGYYRCSTDkDCKARKQVECCRADPGTLILTYTGEHSHP 299
                                   99***********************9998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-28236301IPR003657WRKY domain
SuperFamilySSF1182901.96E-24239301IPR003657WRKY domain
SMARTSM007744.1E-33240300IPR003657WRKY domain
PfamPF031066.6E-23242299IPR003657WRKY domain
PROSITE profilePS5081129.597242301IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MSGGAAITKP NKLLSRASGP TLAEEERPSR RLGRSIGRAS ENIDLFYVPC AADPGARTPR  60
VTLARRARLI PPRVRPAPAT TRIHSHFSLP LPASTASPES FCESLQVNAS SPSVHRERER  120
EREPGEMEGD LGWCGAGSSN NWDLHAVVRF ACGDTSVPPS DDAFPWPGPP QPLLTDSAVD  180
DPSRRPQPSS PGNEQTTTQQ PARAEEAPAK PRAKPTRSKR KSKKRQVNKE VTRVPVGSPS  240
PDLWAWRKYG QKPIKGSPYP RGYYRCSTDK DCKARKQVEC CRADPGTLIL TYTGEHSHPV  300
PLYRNSLAGT TRSKPQQQQS ASSTAEETQV TQQAQSPPVS ESAGLSPSPA DAKPQQQGSP  360
STCDRLSPST PLRSPSVSFE YEDEEDDDTL AVRLLLEETE MAAEDDTLQF FQPDELARPG  420
FPGSEPAPAS GNCSGACADA MLFPNNKPDG PVGPLGPVIT GGAEDVMLFQ FQNPVEPQPS  480
PASASVANGS AETASLINFV DEKFSISGLS AWEAAAAAAA SGWGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-16229301679Disease resistance protein RRS1
5w3x_D2e-16229301679Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00034.1.g00810.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812935.11e-103WRKY transcription factor 22-like
TrEMBLA0A2T7DY591e-104A0A2T7DY59_9POAL; Uncharacterized protein
STRINGPavir.Da00956.1.p6e-95(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125622536
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-36WRKY family protein