PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00032.1.g00310.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 452aa MW: 49008.1 Da PI: 10.7883

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00032.1.g00310.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	20.6	9.8e-07	427	448	1	22
G2-like 1 kprlrWtpeLHerFveaveqLG 22 k rl Wt +LH++Fv a ++LG Zpz_sc00032.1.g00310.1.am.mk 427 KSRLSWTRQLHHQFVTAADSLG 448 68*******************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00156	1.01E-7	291	361	No hit	No description
Gene3D	G3DSA:3.40.50.2300	5.0E-11	295	371	No hit	No description
SuperFamily	SSF52172	1.39E-10	295	372	IPR011006	CheY-like superfamily
Gene3D	G3DSA:1.10.10.60	1.1E-5	426	450	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence Send to blast
MCPSLALLSQ GRKGVWDHPV HAPFFVLSSL SGSLLPSSAR SEPSIMAGAM ARHGGGDDRY 60 SPRRRCWRML REEGTGAEGG GGSRSMTGAA RFLIFVVAPA VRRAIEAVAM NTVHHQAGSK 120 ARAATGRPLQ SLSILGCGLE RICIAHRRQP EAKAAEPRAA AAVLANYWPG RREASRRGPP 180 ASWDGTSVEV DVENILPAGW RPIRLNTAGK ILASPRRRRS IGAYVPGSSP PHNAVVEEAG 240 STWGLLPPHP RSRLHVGAAA PTPELVYLSK RARFPLIDRY PSGSPLLPST LANLQTVDLI 300 ISDAFFPVED GLLILQQVTS KFDIPAVNTG TVMKYITNGA SDFLIKPVRI EELKNIWQHV 360 FRKKIGEERG KNSNAQHVVD QVFYPPNVAP SPSPARSTGI TEASMALMDS EVREARGTVT 420 DVKDLRKSRL SWTRQLHHQF VTAADSLGVE SK

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence Send to blast

MCPSLALLSQ GRKGVWDHPV HAPFFVLSSL SGSLLPSSAR SEPSIMAGAM ARHGGGDDRY  60
SPRRRCWRML REEGTGAEGG GGSRSMTGAA RFLIFVVAPA VRRAIEAVAM NTVHHQAGSK  120
ARAATGRPLQ SLSILGCGLE RICIAHRRQP EAKAAEPRAA AAVLANYWPG RREASRRGPP  180
ASWDGTSVEV DVENILPAGW RPIRLNTAGK ILASPRRRRS IGAYVPGSSP PHNAVVEEAG  240
STWGLLPPHP RSRLHVGAAA PTPELVYLSK RARFPLIDRY PSGSPLLPST LANLQTVDLI  300
ISDAFFPVED GLLILQQVTS KFDIPAVNTG TVMKYITNGA SDFLIKPVRI EELKNIWQHV  360
FRKKIGEERG KNSNAQHVVD QVFYPPNVAP SPSPARSTGI TEASMALMDS EVREARGTVT  420
DVKDLRKSRL SWTRQLHHQF VTAADSLGVE SK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00032.1.g00310.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	6e-23	response regulator 2