PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00002.1.g02600.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 466aa    MW: 51177.3 Da    PI: 5.9198
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00002.1.g02600.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like795.7e-25230274145
                         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 
                                     k+r+rWtpeLHe+Fv+av+qLGGsekAtPk +l+lmkv+gLt++h
  Zjn_sc00002.1.g02600.1.sm.mkhc 230 KQRMRWTPELHECFVDAVNQLGGSEKATPKGVLKLMKVEGLTIYH 274
                                     79*****************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-22228274IPR009057Homeodomain-like
SuperFamilySSF466892.69E-10229274IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-16230273IPR006447Myb domain, plants
PfamPF002491.7E-5232272IPR001005SANT/Myb domain
PfamPF143796.4E-25307354IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MKKFNLMQSQ NSRVFGAMST YLPVLPNAMK ESLPRPLNPQ YIPMSRQLPD DSIPLRHSAL  60
QSVPLHPRDG SIDSSFSSYC ASQNDSVSNH ERQSIVTSFI SQHANVEVFH PLSDNALGTQ  120
IEAAWLPSSI DVLPGYMDNV TAPDDQIQSG SSAMASDEVA NQNKWLAEIM NDDWKDILDA  180
TATDSQSKTM VQPSNSAASQ PAMNQSASCL SAEICPVAGP TNSNNSSAAK QRMRWTPELH  240
ECFVDAVNQL GGSEKATPKG VLKLMKVEGL TIYHKYRTAR YKPDLSEGTS EKRTTTEELS  300
LDLKTSMDLT EALRLQMEVQ KRLHEQLEAQ RKLQLRIEEQ GKYLQMMLEK QCKSTTEEVQ  360
EPSSGYEEPD LSHSAHKDSG AAVVQNKTGD MTGIAERENG MAHVGVKHKL AEADSDPQAA  420
ANYGSSISQE KRRGSVRRVG FDAANSRLLA AHLSFLLLGG INLDKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-24229282160Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-24229282160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-24229282160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-24229282160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-24229282160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-24229282160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-24229282160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-24229282160Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004984500.10.0protein PHOSPHATE STARVATION RESPONSE 1
RefseqXP_004984501.10.0protein PHOSPHATE STARVATION RESPONSE 1
SwissprotB8ANX91e-158PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1
TrEMBLK4A9X60.0K4A9X6_SETIT; Uncharacterized protein
STRINGSi035682m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19713789
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.11e-64phosphate starvation response 1