PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015877768.1
Organism
Ziziphus jujuba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 620aa    MW: 67027.9 Da    PI: 6.7486
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015877768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.63.5e-30357415259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+H h+
  XP_015877768.1 357 NDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHSHP 415
                     8*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.8E-33341417IPR003657WRKY domain
SuperFamilySSF1182901.83E-27349417IPR003657WRKY domain
PROSITE profilePS5081129.103351417IPR003657WRKY domain
SMARTSM007744.4E-36356416IPR003657WRKY domain
PfamPF031064.1E-26357415IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    Send to blast
MAKGSGLSID SDPIGFFLHR PIVLNSFQDD KNNYIHHNNK KKLLSNSMDN TIHQRSPPPP  60
PPPTTLQFPV NLNRTGHDDD DHHHHRHDSP PSSSDQKRTV IDEMDFFADH KNYDHRSNAN  120
SSSAADNNGH REIQLNVNTG LNLLTTNTSS DQSVVDDGIS PNIVDEKKAK SELAVLHAEL  180
ERMNAENQRL KDMLNQVTSN YNTLQMHLMT LMQNQKADNS SEGHGVFDGK LELEKKNSDN  240
GGAVVPRQFM DLGLAATNNG DTDEPSLSSS EERRSGSAGN NIKNGHGDDQ GPVLDQEKKE  300
FDRGIGREDG ADQSNSHGWG PNKVPRLNSS KEADQTEATM RKARVSVRAR SEAPMINDGC  360
QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED RTILITTYEG NHSHPLPPAA  420
MAMASTTSSA ARMLLSGSMS SADGLMNPNF LARTILPCSS SMATISASAP FPTVTLDLTQ  480
SPNPLQHQRP PTQFHISFPN PSQNLANSPS SLLPQIFGQA LYNQSKFSGL QMSQDMAEPA  540
QLGHQPQPQQ LGQHGSLTDT VSAATAAITA DPNFTAALAA AITSIIGGGA GAHPNNSAAA  600
TTPTNNNTSS NANVTSSNSN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-22343419176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015877768.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015877768.10.0probable WRKY transcription factor 31
SwissprotQ9XEC31e-140WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2I4DX560.0A0A2I4DX56_JUGRE; probable WRKY transcription factor 31
STRINGEMJ181870.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-108WRKY family protein