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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_013627201.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
LFY |
| Protein Properties |
Length: 415aa MW: 46269.9 Da PI: 6.7885 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013627201.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 608.7 | 1.2e-185 | 1 | 392 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95
mdpe f++ lf+w+p +++++pa + + +++s+a + ++aa ++l +le lf yGvr++t+akiaelGft+stLv+mkdeel+d+m+sls+
XP_013627201.1 1 MDPEGFTSGLFRWNPTRVMVQAPAPIPPPQQQSPA--TPQTAAFGMRLGGLEGLFGPYGVRFYTAAKIAELGFTASTLVGMKDEELEDMMNSLSH 93
9*************999998888888777654444..467777788899********************************************** PP
FLO_LFY 96 ifrldllvGeryGikaavraerrrlee..eeaekkrrkll...sedeet..aldalsqe....glseepvqeekeaagsggeglgeaelvaaeek 179
ifr++llvGeryGikaavraerrrl+e ee++++rr+ll + d+ t aldalsqe gls+epvq++ ++ ++g +g g+ + a ++
XP_013627201.1 94 IFRWELLVGERYGIKAAVRAERRRLQEeeEEESSRRRHLLlsaAGDSGThlALDALSQEddwtGLSQEPVQHQDQTDAAGINGGGRGGYWEAGQT 188
*************************995444567778877787455544569******988889******9976655555555445555444422 PP
FLO_LFY 180 kseeekkkaskkkqkrkkkkelkseededeeeeededeeg...sgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiak 271
+ kk++ + ++++k+ + + e+d+d +e ed+d+++ ++ +g+erqrehPfivtepgevargkknGLDYLf+LyeqCrefLlqvq+iak
XP_013627201.1 189 ---TIKKQQ-Q-RRRKKTIVT-SVETDDDGNEGEDDDGMDvvnGSGSGMERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLLQVQTIAK 277
...222222.2.333333333.334444444444444444333667789********************************************** PP
FLO_LFY 272 erGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLs 366
+rGekcPtkvtnqvfryakk+ga+yinkPkmrhYvhCYalhcLdeeasnalrrafkergenvG+wrqacykplv+ia r+gwdidavfnahprLs
XP_013627201.1 278 DRGEKCPTKVTNQVFRYAKKSGANYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGSWRQACYKPLVDIACRHGWDIDAVFNAHPRLS 372
*********************************************************************************************** PP
FLO_LFY 367 iWYvPtkLrqLChlerskas 386
iWYvPtkLrqLChler++a+
XP_013627201.1 373 IWYVPTKLRQLCHLERNNAV 392
****************9975 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 415 aa
Download sequence Send
to blast |
MDPEGFTSGL FRWNPTRVMV QAPAPIPPPQ QQSPATPQTA AFGMRLGGLE GLFGPYGVRF 60
YTAAKIAELG FTASTLVGMK DEELEDMMNS LSHIFRWELL VGERYGIKAA VRAERRRLQE 120
EEEEESSRRR HLLLSAAGDS GTHLALDALS QEDDWTGLSQ EPVQHQDQTD AAGINGGGRG 180
GYWEAGQTTI KKQQQRRRKK TIVTSVETDD DGNEGEDDDG MDVVNGSGSG MERQREHPFI 240
VTEPGEVARG KKNGLDYLFH LYEQCREFLL QVQTIAKDRG EKCPTKVTNQ VFRYAKKSGA 300
NYINKPKMRH YVHCYALHCL DEEASNALRR AFKERGENVG SWRQACYKPL VDIACRHGWD 360
IDAVFNAHPR LSIWYVPTKL RQLCHLERNN AVAAAATLVG GISCEGSPAS GRFGV
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed at an early stage of floral initiation. |
| Uniprot | TISSUE SPECIFICITY: Acts in the floral primordia. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Controls floral meristem identity. Is required very early in flower development and may act here as a transcription factor. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 0.0 | floral meristem identity control protein LEAFY (LFY) |
