 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_013584234.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
WOX |
| Protein Properties |
Length: 351aa MW: 40001.6 Da PI: 8.3038 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013584234.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 69.3 | 4.6e-22 | 75 | 134 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t++ql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++
XP_013584234.1 75 SRWNPTPDQLKALEELYQQgTRTPSADHIQQITAQLrrygKIEGKNVFYWFQNHKARERQ 134
7*****************99**************************************97 PP
|
| 2 | Wus_type_Homeobox | 115.2 | 3.1e-37 | 74 | 136 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++RW+Ptp+Q+k Leely++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+
XP_013584234.1 74 SSRWNPTPDQLKALEELYQQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKR 136
79***********************************************************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MWMMGYNEGG ADSFNGGRKL RPLIPRLSSC PSAAANTNSD HRFNMVMTTM TAEQNKRELM 60
MLNSEHQHPP MMVSSRWNPT PDQLKALEEL YQQGTRTPSA DHIQQITAQL RRYGKIEGKN 120
VFYWFQNHKA RERQKRRRQM ENGHDESVFT TTSLVSNHGF DKKYPPGYKV EQTKNWICSV 180
GCDTQPQKPH ELHHQEEPVS IALATKGNGR YVGNERQSFP GRNAMSQMMQ LAPGHYPSSR 240
QQQHHHELIL NSTTVRSSFS TSNSTVSAAK DTVTASPSFL RTRAATNTGT CDDNKDQERH 300
EDCLNGELDH QEKTLELFPL RKEGFCNNGG DDGKEKESAI HCFYEFLPLK N
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Specifically expressed during initiation of the shoot apical meristem, when cotyledonary primordia arise at the flanks of the apical embryo domain phase. Confined to the initiating vascular primordium of the cotyledons during heart and torpedo stages, but only weakly expressed during bent cotyledon stage. {ECO:0000269|PubMed:14711878}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY251394 | 0.0 | AY251394.1 Arabidopsis thaliana WOX1 protein mRNA, complete cds. |
