PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012569604.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 423aa    MW: 45294.2 Da    PI: 8.605
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012569604.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.54.1e-20278340163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkrerrkq+NRe+ArrsR+RK+ae eeL++kv++L ae  +Lk+e+++l + ++kl++e+
  XP_012569604.1 278 ERELKRERRKQSNRESARRSRLRKQAEAEELARKVESLNAESASLKSEINRLAESSEKLRMEN 340
                     89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.2E-38196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.2E-31129258No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-15272338No hitNo description
SMARTSM003381.9E-18278342IPR004827Basic-leucine zipper domain
PfamPF001701.9E-18278340IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.162280343IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-9281337No hitNo description
CDDcd147023.52E-20283331No hitNo description
PROSITE patternPS000360285300IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MGNSEEEKST KTEKPSSPVI VDQTNQTNVH VYPDWAAMQA YYGPRVAMPP YYNSPVASGH  60
TPHPYMWGPQ PMMPPYGHPY TAIYPHGGVY AHPGVPVGPN PHSQGISSSP ATGTPLSIET  120
PPKSSGNTDQ GLMKKLKGFD GLAMSIGNGH VESAEPGSDS RLSQSVDTDG SSDGSDGNTA  180
GANQTRRKRK REGTPTTDGE GKTHTQGSQV SKEIAASNKT MAVAPAGVAG HLAGPVVSPA  240
MTTALELKNP SSVHSKTNVT SAPQPCAVLP AETWLQNERE LKRERRKQSN RESARRSRLR  300
KQAEAEELAR KVESLNAESA SLKSEINRLA ESSEKLRMEN AALREKFKIA QLGQPKDIIL  360
TSIDSQRTTP VSTENLLSRV NNSSSNDRTV EDENGFCDNK SNSGTKLHQL LDASPRADAV  420
AAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185190RRKRKR
2294300RRSRLRK
3294301RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012569604.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1390120.0BT139012.1 Medicago truncatula clone JCVI-FLMt-18F5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004494783.10.0common plant regulatory factor 1
RefseqXP_012569604.10.0common plant regulatory factor 1
RefseqXP_027188478.10.0common plant regulatory factor 1
SwissprotQ990891e-144CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A1S3E2K80.0A0A1S3E2K8_CICAR; common plant regulatory factor 1
STRINGXP_004494781.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-117G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]