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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011402167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
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Family | ERF | ||||||||
Protein Properties | Length: 515aa MW: 53976 Da PI: 6.3687 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.5 | 7.9e-09 | 370 | 427 | 4 | 56 |
AP2 4 kGVrwdkkrgr.WvAeIrd.pse...ng.krkrfslgkfgtaeeAakaaiaarkklege 56 +GV++ k + W A++ s+ +g k+ ++lg++ t e Aa+a++ a+ kl+g+ XP_011402167.1 370 RGVSREK-WSLfWDAYVDRrESStmlDGfKQEAVWLGRYPTVESAARAHDIAAIKLHGP 427 9***887.8888****777555578888999**************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 2.1E-5 | 368 | 440 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 15.343 | 368 | 434 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-9 | 369 | 434 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.9E-11 | 370 | 434 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.5E-6 | 370 | 426 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 515 aa Download sequence Send to blast |
MNGTPGSDPG GLDFLDFPSS PGSQPRSAPH HGLPEGDTPP SHPKATPGVT ANSTLDHAIH 60 KLASDDFTRL LHFEAMCETD GDLDDLSRVF QGNEGAELLD PGFFNDLMSP EDPAHGTPAR 120 NGHPGHAQPH PADFRGSMGM HHAPQQAGPA PASHTSEAYP ASPPPSTPQR GPPAPQDPPP 180 AGGVWLLDAQ ASPSPGSVPM TPMHLYPFQL QPGAMFVDPG TGQALPMQWG LAYMPGQYPY 240 TPPPMHHVVH GMPGSGAGTP SPSRKGPKRR RPSRSAHGLL TALVTQDLMS TPPEPAAPVG 300 PEVGGAEGGQ AGGTMRGVXX XXRHLRGQSA HGLLTALVTQ DLMSTPPEPA APVGPEVGGA 360 EGGQAGGTMR GVSREKWSLF WDAYVDRRES STMLDGFKQE AVWLGRYPTV ESAARAHDIA 420 AIKLHGPAAA TNYEPETYSR VLPTLSSHSE DQVVGALRKD SALAVQRTSR FRGVRRVGAR 480 AFDARLEDAL GGDGSGLNTS PSSHTSMFVP DLSSS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011402167.1 | 0.0 | AP2-like ethylene-responsive transcription factor ANT | ||||
TrEMBL | A0A087STR0 | 0.0 | A0A087STR0_AUXPR; AP2-like ethylene-responsive transcription factor ANT | ||||
STRING | A0A087STR0 | 0.0 | (Auxenochlorella protothecoides) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-10 | AP2 family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 23616861 |