PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095676.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 322aa    MW: 35863.3 Da    PI: 7.1008
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.12.6e-51111371129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deelv++yL k+v+g   ++   + evd++k+ePwd+p+++  + k+wyf+s+rd+kyatg r+nrat sgyWkatgkd++v++ 
  XP_011095676.1  11 LPPGFRFHPRDEELVCDYLMKRVAGCAQPF-PLLIEVDLNKCEPWDIPETACVGGKQWYFYSQRDRKYATGLRTNRATVSGYWKATGKDRPVTR- 103
                     79************************9888.7799*************7777799**************************************9. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     kg+lvg++ktLvfy+grapkg+k+dWvmhe+rle
  XP_011095676.1 104 KGALVGMRKTLVFYQGRAPKGRKSDWVMHEFRLE 137
                     999****************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-604162IPR003441NAC domain
PROSITE profilePS5100556.32611162IPR003441NAC domain
PfamPF023654.1E-2612136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MSSLSNVEAK LPPGFRFHPR DEELVCDYLM KRVAGCAQPF PLLIEVDLNK CEPWDIPETA  60
CVGGKQWYFY SQRDRKYATG LRTNRATVSG YWKATGKDRP VTRKGALVGM RKTLVFYQGR  120
APKGRKSDWV MHEFRLEGAH GPSPKVVSPA KDDWVLCRVF LKNVSEIPGK QETGNGCDAT  180
TSPSSSLPPL MEPFITFDQT QASANYEYHQ YHEQVPCFSN FTTNQTSPTF SLLTHTDPQE  240
IFPTKILPNF GGIMPDFGIY NSTNDSSSCD KNAIKAVLNH FNGAQSANDQ LSVNGCSSFG  300
EGSSSDSYLS EVGLSCMWNQ YL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-5451639169Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095676.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by auxin.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095676.10.0NAC domain-containing protein 21/22-like
SwissprotQ84TE61e-110NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLA0A2G9I9R71e-157A0A2G9I9R7_9LAMI; Uncharacterized protein
STRINGMigut.M01566.1.p1e-129(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13424297
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.21e-103NAC domain containing protein 1
Publications ? help Back to Top
  1. Le Hénanff G, et al.
    Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
    J. Exp. Bot., 2013. 64(16): p. 4877-93
    [PMID:24043850]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Xiao D, et al.
    SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1275-91
    [PMID:26304848]
  4. Huo X,Wang C,Teng Y,Liu X
    Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
    BMC Plant Biol., 2015. 15: p. 266
    [PMID:26530097]
  5. Chen X, et al.
    Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
    Plant Physiol., 2016. 170(4): p. 2136-45
    [PMID:26850273]
  6. Liu C,Wang B,Li Z,Peng Z,Zhang J
    TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
    Plant Physiol., 2018. 176(1): p. 742-756
    [PMID:29122985]