PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095415.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 478aa    MW: 52154.2 Da    PI: 6.3046
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-30264322259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK  kg+++pr+YYrCt+a  Cpv+k+v+r+aed +v+++tYeg+Hnh+
  XP_011095415.1 264 SDGCQWRKYGQKLAKGNPCPRAYYRCTMAvACPVRKQVQRCAEDRSVLITTYEGRHNHP 322
                     7****************************9****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-32248324IPR003657WRKY domain
SuperFamilySSF1182902.62E-27256324IPR003657WRKY domain
PROSITE profilePS5081129.103258324IPR003657WRKY domain
SMARTSM007742.9E-35263323IPR003657WRKY domain
PfamPF031063.6E-26265322IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MENGFNQEMM ILNSFDDHQG LSDVDHGEKR VLSEMDFFAA EERNYSSTTV QIKKESDEPA  60
GKELLLHIST GLDLLTSNPN VMSENRSMDS NRSAEGTTTS DTEFVVLKAE LDRMNTENER  120
LRAILNQIND KYYSLKMHIM SLSNHQQNPG SSAEIKSDDR KMINEVGDEE NHGFGINLKH  180
RGQREGKDIG KTQQQLECSS SPLCTEEMSM ANLRLQKSIN SVQINKVPHD QPHTSKDLDH  240
QAAEATMKKA RVSVRARSEA TMISDGCQWR KYGQKLAKGN PCPRAYYRCT MAVACPVRKQ  300
VQRCAEDRSV LITTYEGRHN HPLPPAAMAM ASTTSAAATM LLSGPMPSAD GLQNSNVLAR  360
NVQLPYSQNL ATISASAPFP TVTLDLTNNN ANIPTNSLLH SPQAPSPFSS HQPQHLSPGA  420
GIQVLDSSQD IVNAATAAIA ADPNFTAALA AAISSIIGNS QRNEGVVDHN NSVGDVGK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22250326176WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095415.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095415.10.0probable WRKY transcription factor 31
TrEMBLA0A2G9GA491e-147A0A2G9GA49_9LAMI; Uncharacterized protein
STRINGVIT_12s0059g00880.t011e-112(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.16e-75WRKY family protein