PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094007.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 537aa    MW: 59874.9 Da    PI: 6.2512
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.5e-13356400554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h + ErrRR+++N++f+ Lr+llP+       K +Ka++L  ++eY++sL
  XP_011094007.1 356 HMISERRRREKLNESFQILRSLLPPG-----SKKDKASVLSSTTEYLSSL 400
                     8899********************95.....599**************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.701351400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-17352420IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.63E-12353405No hitNo description
Gene3DG3DSA:4.10.280.102.1E-16355418IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.8E-11356400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.0E-15357406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    Send to blast
MDSIFLLGEG ERAAFLQQMM QSFGCAYICL WSYLPPPSNC LLALDGVYQE VSDQPSSSAG  60
SLARRLFGVY RESVIFIDSG QIPGFAFKNH LSYMELKLHD LQRMASSEAQ LHFYQEAGIK  120
TVVFMGCATG EIELGMCNDP QVDLQIEMKN LFPADFSRQA MSSEQPPPTD PNQPPSSSSS  180
SLRSLSVDST EYSPLLFNIP TSSFIQEPSK EALNIGQTLL EETLRSLPIS APLITTSPDH  240
HQAAIQALSQ IRNVQFPTIE SEDSAMTKAI LAVLSSPSST SSSCHQQIAP NLPPISHSPT  300
AFRSYQSAAL TPVAARSSRK HSMFRRAVLF FRNLNLRRRQ ELQIQGNRPT TTQLHHMISE  360
RRRREKLNES FQILRSLLPP GSKKDKASVL SSTTEYLSSL KSQVEELSKR NQMLESQLSV  420
QRSVEASNQA QVEGSSSSVE RVNVEINQVS SSASEARFLD LRVTVRGESS MLDLVIRVLE  480
FLKQERNVIL MSLESNTRML ESIPVHGIML RLKIEGDEFD ESAFQEAVRR VVDDLPH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1359364ERRRRE
2360365RRRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094007.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094007.10.0putative transcription factor bHLH041
TrEMBLA0A022QLG20.0A0A022QLG2_ERYGU; Uncharacterized protein
STRINGMigut.J00583.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.14e-63bHLH family protein