PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011093363.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 366aa    MW: 39530.1 Da    PI: 8.665
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011093363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_172.75.1e-23222284163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN+aLk+e+++l + ++klk ++
  XP_011093363.1 222 ERELKRERRKQSNRESARRSRLRKQAETEELANKVQALTAENMALKSEINKLMESSEKLKLDN 284
                     89**********************************************************887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077779.0E-19159IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.2E-1180198No hitNo description
Gene3DG3DSA:1.20.5.1707.0E-18215281No hitNo description
SMARTSM003386.5E-21222286IPR004827Basic-leucine zipper domain
PfamPF001703.6E-21222284IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.001224287IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.06E-11225281No hitNo description
CDDcd147025.41E-20227275No hitNo description
PROSITE patternPS000360229244IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MQAFYGPRLA VPPYMNSAVA SHAPPPYMWG PPQSMIPPYG APYAAFYAHG GVYAHPGVPL  60
AGTSLSMETP VKSSGNTDGG FVKKLKEIDG LAISIGNGNG SSAEHGTERR TSDSYDTEDS  120
SDGSNGDTAG AGQSGKKRSR QGSPSRAGDG KVEKKNSIVP ALEVDRTSEK MIDAIPNANA  180
PVKAMENMNT ALELKDPSLT VKSGPTHVPQ ASMPNETWLQ NERELKRERR KQSNRESARR  240
SRLRKQAETE ELANKVQALT AENMALKSEI NKLMESSEKL KLDNAALLEQ LKDAQLGQTD  300
EISLHKIDNL RLKKPVGTVN LLARVNNSDS TDRRNEEGES YENRSPGAKL HQLLDSSPRT  360
DAVAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238244RRSRLRK
2238245RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011093363.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093351.10.0common plant regulatory factor 1 isoform X1
RefseqXP_011093363.10.0common plant regulatory factor 1 isoform X5
SwissprotQ990891e-122CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A2G9I9X40.0A0A2G9I9X4_9LAMI; Uncharacterized protein
STRINGMigut.B01828.1.p1e-179(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.15e-89G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]