PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011093357.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 399aa MW: 43145 Da PI: 7.321 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 72.6 | 5.8e-23 | 255 | 317 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN+aLk+e+++l + ++klk ++ XP_011093357.1 255 ERELKRERRKQSNRESARRSRLRKQAETEELANKVQALTAENMALKSEINKLMESSEKLKLDN 317 89**********************************************************887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 3.0E-31 | 1 | 92 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 1.4E-11 | 113 | 231 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 8.0E-18 | 248 | 314 | No hit | No description |
Pfam | PF00170 | 4.1E-21 | 255 | 317 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 6.5E-21 | 255 | 319 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.001 | 257 | 320 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.5E-11 | 258 | 314 | No hit | No description |
CDD | cd14702 | 4.45E-20 | 260 | 308 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 262 | 277 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence Send to blast |
MGNSEEAKPS KSEKSSPPAM DQNNVHVYPD WATMQAFYGP RLAVPPYMNS AVASHAPPPY 60 MWGPPQSMIP PYGAPYAAFY AHGGVYAHPG VPLAGTSLSM ETPVKSSGNT DGGFVKKLKE 120 IDGLAISIGN GNGSSAEHGT ERRTSDSYDT EDSSDGSNGD TAGAGQSGKK RSRQGSPSRA 180 GDGKVEKKNS IVPALEVDRT SEKMIDAIPN ANAPVKAMEN MNTALELKDP SLTVKSGPTH 240 VPQASMPNET WLQNERELKR ERRKQSNRES ARRSRLRKQA ETEELANKVQ ALTAENMALK 300 SEINKLMESS EKLKLDNAAL LEQLKDAQLG QTDEISLHKI DNLRLKKPVG TVNLLARVNN 360 SDSTDRRNEE GESYENRSPG AKLHQLLDSS PRTDAVAAG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 271 | 277 | RRSRLRK |
2 | 271 | 278 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00318 | DAP | Transfer from AT2G46270 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011093357.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093357.1 | 0.0 | common plant regulatory factor 1 isoform X3 | ||||
Swissprot | Q99089 | 1e-133 | CPRF1_PETCR; Common plant regulatory factor 1 | ||||
TrEMBL | A0A2G9I9X4 | 0.0 | A0A2G9I9X4_9LAMI; Uncharacterized protein | ||||
STRING | Migut.B01828.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 2e-99 | G-box binding factor 3 |
Publications ? help Back to Top | |||
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