PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011080098.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 490aa    MW: 53545.4 Da    PI: 5.2587
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011080098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.14.7e-34265319155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  XP_011080098.1 265 KQRMRWTPELHESFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 319
                     79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.894262322IPR017930Myb domain
SuperFamilySSF466896.09E-18263319IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-31264321IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-25265319IPR006447Myb domain, plants
PfamPF002494.9E-10267318IPR001005SANT/Myb domain
PfamPF143795.4E-26351397IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0016036Biological Processcellular response to phosphate starvation
GO:0055063Biological Processsulfate ion homeostasis
GO:0071486Biological Processcellular response to high light intensity
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MEAKPALAIQ RSGASQISNF GTSEALSSSF PVLPPPLEDI YPKTSDSQHI PLERDLTRRP  60
SAVVSSFSSN SGVVGHIFSA SSGYSTDLHF SSGQQQEKHP RQSPFISQST NSGKSVTLPQ  120
SVDSRVLQST ASSHFNKENN NSWCTDPLPD FLDFPMTTII QNNQLDGSNR GGIAIPSEEL  180
SKSSDWQDWA DQLISDNDDL ATDWNGLFAD PSVSDPGPKA SYQISLQSTD ISTQQPHISQ  240
QLPGTPAEIC TGAGQSSSAN AAPAKQRMRW TPELHESFVE AVNKLGGSER ATPKGVLKLM  300
KVEGLTIYHV KSHLQKYRTA RYKPETTEES SETKLASIED LSSLDLKTGI DITEALRLQM  360
EVQKRLHEQL EIQRNLQLRI EEQGRYLQMM FEKQCKSGMG VLKGGSSTSE NPQEPIDTVQ  420
NSSAKETLRA ELGKKETDGE PADIAKTSGE TSQRVGEKQK TLEAEVPENT EACAGCTSEL  480
SPKKRVKVHA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-31264323160Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-31264323160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-31264323160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-31264323160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-31264323160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-31264323160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-31264323160Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-31264323160Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011080098.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080098.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X2
TrEMBLA0A022S2540.0A0A022S254_ERYGU; Uncharacterized protein
STRINGMigut.D00466.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27532349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-94phosphate starvation response 1