PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075487.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WOX
Protein Properties Length: 464aa    MW: 52252.1 Da    PI: 10.3001
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.28.7e-21347406357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                      R+++t+eq+++Lee++++  r+psa++++++A+kl    +++ ++V++WFqN++a+e++
  XP_011075487.1 347 GRWSPTREQVQALEEMYRRgIRTPSADQIQQIAAKLrrfgKIEGKNVFYWFQNHKARERQ 406
                     5*****************99**************************************97 PP
2Wus_type_Homeobox110.59.2e-36346408365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        + RW+Pt eQ++ Lee+y++G+rtP++++iq+i+a+L+++Gkie+kNVfyWFQN+kaRerqk+
     XP_011075487.1 346 SGRWSPTREQVQALEEMYRRGIRTPSADQIQQIAAKLRRFGKIEGKNVFYWFQNHKARERQKK 408
                        67***********************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003894.9E-5344411IPR001356Homeobox domain
SuperFamilySSF466891.84E-12347413IPR009057Homeodomain-like
PROSITE profilePS5007111.483348407IPR001356Homeobox domain
PfamPF000462.8E-18348406IPR001356Homeobox domain
CDDcd000864.50E-7348408No hitNo description
Gene3DG3DSA:1.10.10.604.9E-9348406IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MTPESSLKPS NALNGVHGMH VVSHSPFSFQ EIKQHADFNE SAYGPSNTGS KQRLIVQKVW  60
HQRPACLRPI HCCRTGDKNI AETVANVLTS LPFIALGLQA PRKNLNCKIY ANSLIGVGIA  120
SSFYHASRGK LRKYLRWADY TMIATTTVCL SRALRNENPK LLMAASAFFL PIQPVMVSAV  180
HTGMMEVAFA KRAFQDPELR MAHNVHKMSS LLGGALFVAD DLLPQTPFLH AGWHLAAAVG  240
REGMWMMESN NHEHGKELMR MSTSASTDGP KLRPLMPRPI SSSNSTKSSS STFSTITSTL  300
PCCIRNPNNI LTWNYPISMI NTSGCVINDY CVKRDDEIIK TAPLVSGRWS PTREQVQALE  360
EMYRRGIRTP SADQIQQIAA KLRRFGKIEG KNVFYWFQNH KARERQKKRR QLQLIPLPAN  420
KIHHQTLASA PPELRRRYFD IEHHKKLPNP SNCTTHSEYQ CTDQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011075487.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075495.11e-177uncharacterized protein LOC105159950
RefseqXP_020547739.11e-177uncharacterized protein LOC105159950
TrEMBLA0A022QWV01e-147A0A022QWV0_ERYGU; Uncharacterized protein
STRINGMigut.L00354.1.p1e-147(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.11e-26WUSCHEL related homeobox 1