![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010942362.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
LFY |
Protein Properties |
Length: 451aa MW: 50609.8 Da PI: 7.3136 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010942362.1 | genome | OG | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Egu&pid=XP_010942362.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 599 | 1e-182 | 1 | 425 | 1 | 386 |
FLO_LFY 1 mdp.eafsaslfkwdpraaa...aapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmk 91
mdp +afsa++fkwdp a + p+ ++ e+ +++++++ ++++ rel e+f +yGvry+tva+++elGft+stLv+m++ e++++++
XP_010942362.1 1 MDPgDAFSANIFKWDPPAPPpcrSMEPTPAAAEEGEEPQQMQERRGGEECQPRELGEVFAGYGVRYATVARLGELGFTASTLVGMTEGEVEEVLS 95
666367*********64332232222233333333344445666666777789****************************************** PP
FLO_LFY 92 slseifrldllvGeryGikaavraerrrlee....................eeaekkrrkll..........sedeetaldalsqeglseepvqe 156
+l+++fr+dll+GeryGikaa+r errrl + ++ +++rr ll ++aldalsqeglseepvq+
XP_010942362.1 96 ALAHLFRWDLLLGERYGIKAALRVERRRLLDhhqamlflrhdhnhqpaagvDD-DARRRMLLlnspghlhhnLGGLNHALDALSQEGLSEEPVQQ 189
*****************************999******************644.5555554447776543222223459**************** PP
FLO_LFY 157 ekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeeg..sgedge.....erqrehPfivtepgevarg 244
e+eaa+sgge ++ + +++++++++++ kk++++k+k+kk++++ ee+e+eeeee+ed+ g ++e+g+ erqrehPfivtepgevar+
XP_010942362.1 190 EREAAASGGEAINDDGRAKQRRSTKKSKAKKKNRRKNKKKKQRSS-PEEEEEEEEEEEEDGWGtgGSEEGSersvvERQREHPFIVTEPGEVARA 283
*********998877777666544444444443333333333332.2233333333333332222333343566779****************** PP
FLO_LFY 245 kknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqa 339
kknGLDYLf+LyeqCr+fLlqvq++akerG+kcPtkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrra+kergenvGawrqa
XP_010942362.1 284 KKNGLDYLFHLYEQCRHFLLQVQSLAKERGDKCPTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRAYKERGENVGAWRQA 378
*********************************************************************************************** PP
FLO_LFY 340 cykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
cykplvai+ar+gwdidavfnahprLsiWYvPtkLrqLChl+rs+a+
XP_010942362.1 379 CYKPLVAISARHGWDIDAVFNAHPRLSIWYVPTKLRQLCHLARSNAA 425
********************************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 451 aa
Download sequence Send
to blast |
MDPGDAFSAN IFKWDPPAPP PCRSMEPTPA AAEEGEEPQQ MQERRGGEEC QPRELGEVFA 60 GYGVRYATVA RLGELGFTAS TLVGMTEGEV EEVLSALAHL FRWDLLLGER YGIKAALRVE 120 RRRLLDHHQA MLFLRHDHNH QPAAGVDDDA RRRMLLLNSP GHLHHNLGGL NHALDALSQE 180 GLSEEPVQQE REAAASGGEA INDDGRAKQR RSTKKSKAKK KNRRKNKKKK QRSSPEEEEE 240 EEEEEEEDGW GTGGSEEGSE RSVVERQREH PFIVTEPGEV ARAKKNGLDY LFHLYEQCRH 300 FLLQVQSLAK ERGDKCPTKV TNQVFRYAKK VGASYINKPK MRHYVHCYAL HCLDEEASNA 360 LRRAYKERGE NVGAWRQACY KPLVAISARH GWDIDAVFNA HPRLSIWYVP TKLRQLCHLA 420 RSNAATAASS SVLGATSSDG LPPPPPPPPM F
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Nucleic Localization
Signal ? help
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![NLS](draw_nls.php?sp=Egu&pid=XP_010942362.1) |
No. |
Start |
End |
Sequence |
1 | 209 | 215 | RRSTKKS |
2 | 219 | 227 | KKNRRKNKK |
3 | 220 | 225 | KNRRKN |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor that act to specify determinacy in the progenitor cells for both flowers and leaves. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-101 | floral meristem identity control protein LEAFY (LFY) |