PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010936949.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 455aa    MW: 48350.9 Da    PI: 7.9911
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010936949.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.55.1e-22328391164
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                     e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv+eL +eN+aL  ele+l+k++  lk+e+e
  XP_010936949.1 328 ERELKRERRKQSNRESARRSRLRKQQECEELARKVAELNNENSALSVELENLQKLCRDLKAENE 391
                     89**********************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.4E-1960146IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.6E-10168297No hitNo description
Gene3DG3DSA:1.20.5.1706.1E-17322388No hitNo description
PfamPF001701.0E-19328391IPR004827Basic-leucine zipper domain
SMARTSM003381.7E-18328392IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.07330393IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-10331387No hitNo description
CDDcd147023.18E-22333384No hitNo description
PROSITE patternPS000360335350IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MLLIFYLGSS VQLEEGEKRK ERNWRYDCRM ASTEETATAS EKPSKNEKAA PPTAAVVPPS  60
PSQESPAPAQ QLPPPTTHVY XEWAASLQAF YGSGAAATTP QAFFPPSSPS PHPFVWGPHH  120
LMSPYGTPIT YSPMYAHGAL YAHPSMAVGM TYPTTEPSDG KNKGSAASKG SSGNAGGSPG  180
KSGDGGKVTS GSAENASQSG DSGSEGSSDT RDDNTESRDL SASKKRSYGN MIAEVETSQP  240
IVAAQYCGTT AEPSYTSRGR SATKLPVSAP GRTTLTSPPT NLNIGMDLWN TSHAGAGPVR  300
ARPMEVGVAT ATGRRKGATA EQQWMQDERE LKRERRKQSN RESARRSRLR KQQECEELAR  360
KVAELNNENS ALSVELENLQ KLCRDLKAEN ESLEAGLTRF YGAGVASTLG IKGESPAMPS  420
VGGDSSGHVH QSPVDSNQNT GKFYTGTGNP ESTSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1344350RRSRLRK
2344351RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936949.10.0LOW QUALITY PROTEIN: G-box-binding factor 1-like
TrEMBLA0A2H3ZBF80.0A0A2H3ZBF8_PHODC; G-box-binding factor 1-like isoform X1
STRINGXP_008811316.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-42G-box binding factor 1