PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912974.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 398aa    MW: 44976.4 Da    PI: 6.0602
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912974.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.86.5e-30571991128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 
                     lp+G++F+P+d el+ e+L+ kv + +      +  +e+i++v+    i++++P +Lp  +k++ ++++fF++ +++ya+g+rk+r+        
  XP_010912974.1  57 LPAGVKFDPSDVELL-EHLAGKVGKGNlkphmfI--DEFIPTVEedegICYTHPINLP-GIKKDGSSVHFFHRISNAYASGHRKRRKihdecdks 147
                     799************.99*****99997765432..233433322234**********.7788899********************867777766 PP

             NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128
                      ++ +W++tgk+k+v + +g ++g kk++v+y+ ++  g+  k++Wvmh+y+l
  XP_010912974.1 148 EERVRWHKTGKTKPVRE-NGVHKGWKKIMVLYRSSKGGGKpdKANWVMHQYHL 199
                     55899***********9.999***********7655444333*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.27E-3542218IPR003441NAC domain
PROSITE profilePS5100529.35557218IPR003441NAC domain
PfamPF023653.5E-1358199IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MARAWLVNSR GIARKVKNAT RLSNYQIKDL EAEASRKCPN CKHVIDNSDV TIEWPGLPAG  60
VKFDPSDVEL LEHLAGKVGK GNLKPHMFID EFIPTVEEDE GICYTHPINL PGIKKDGSSV  120
HFFHRISNAY ASGHRKRRKI HDECDKSEER VRWHKTGKTK PVRENGVHKG WKKIMVLYRS  180
SKGGGKPDKA NWVMHQYHLG TDEDEKDGEL VVSKIFFQQQ VKQTDKNGIH PVNEEPDMFA  240
VRVSPRTPKT NTPQPPRSKK NSPFDTDEHN LQALPGHNEP YPEVEVTSAP LPVVRLTDEG  300
ESCVWWAGES QAVEEPDPNN LDESLLCHEV LDSFPPIEDC FYHPNFNGDK NETAATKANT  360
LCGFSDLDDI IMDTPPDFQL ADLQFGSQES ITSWLDRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010912974.10.0SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBLA0A2H3ZDK20.0A0A2H3ZDK2_PHODC; SUPPRESSOR OF GAMMA RESPONSE 1-like
STRINGXP_008812203.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.14e-91NAC family protein