PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010910785.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family C2H2
Protein Properties Length: 282aa    MW: 29651.3 Da    PI: 7.127
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010910785.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.00071129151123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C+k+F++   L  H  +H
  XP_010910785.1 129 YECKTCNKCFPSFQALGGHRASH 151
                     99**********99999998887 PP
2zf-C2H213.30.00025195217123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  F++   L  H+r+H
  XP_010910785.1 195 HECSICGSEFNSGQALGGHMRRH 217
                     78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.36E-9128151No hitNo description
PfamPF139129.3E-12128153IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.221129156IPR007087Zinc finger, C2H2
SMARTSM003550.082129151IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280131151IPR007087Zinc finger, C2H2
SuperFamilySSF576671.36E-9190217No hitNo description
PfamPF139125.2E-12194219IPR007087Zinc finger, C2H2
PROSITE profilePS501579.598195217IPR007087Zinc finger, C2H2
SMARTSM003550.021195217IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280197217IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MESPEEAMGS NSTTSNGNGG ECTHATSTAI VVKGKRTKRP RTQPLALAAA MAVADSSSAS  60
SADASGSITE EEEDMANCLI LLAQGRALDA GGPKPELPAE EGGGTDKFTS RRFTEAATTT  120
GGKAGFYVYE CKTCNKCFPS FQALGGHRAS HKKPKLAITA GEEKKASVEE DMLKISMNSF  180
SKAMVSGGST KPRVHECSIC GSEFNSGQAL GGHMRRHRPV VIPEAAEAKK ERTILSLDLN  240
LPAPSDDDRP ELQRPSSPAF SFASKPPLIF PASASALVDC HY
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00487DAPTransfer from AT5G04390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010910785.10.0zinc finger protein ZAT5
TrEMBLA0A2H3Z3L21e-162A0A2H3Z3L2_PHODC; zinc finger protein ZAT5
STRINGXP_008807698.11e-163(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20133285
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.12e-50C2H2 family protein