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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010559200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
ERF |
Protein Properties |
Length: 305aa MW: 33325 Da PI: 6.3131 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010559200.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.9 | 5.8e-19 | 80 | 128 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a+++ + k++g
XP_010559200.1 80 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREAIKIRG 128
9*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0034059 | Biological Process | response to anoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MCGGAIISDF IIRNRGRDVS AADIWPNSSS AKIVGGEFEF ESDPSQLGRG GSFSLKRNRP 60 VSGEGEEAAG RPKRQRKNLY RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD 120 REAIKIRGKK AKVNFPNEDI HFSLPATMNR RKNDPPCHLN PSPNPHLTPP FADLSNTSFG 180 FGNGLNPFPI PDGSNPIQNL GAVRSDSVAE ENSGSSSVLE PANSYSPTAI NGVETKAKEE 240 ENEVQRLSEE LMAFEDYMKF YQIPYLDGQS SMATYAATQV SVVGNLWNFE EAAAVAASPV 300 DSGSA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC002535 | 2e-38 | AC002535.3 Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence. |
GenBank | AY074645 | 2e-38 | AY074645.1 Arabidopsis thaliana At2g47520/T30B22.18 mRNA, complete cds. |
GenBank | CP002685 | 2e-38 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |