PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010111443.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | ERF | ||||||||
Protein Properties | Length: 378aa MW: 42244.1 Da PI: 8.4195 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.6 | 1.7e-09 | 128 | 176 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV ++ ++g+W A+ k lg+f ++eeAa a + a kl+g XP_010111443.1 128 SKYRGVVRHANSGKWQAR---K-----GpgKDSFLGTFESEEEAAIAFDIASIKLKG 176 89****************...5.....34499999****************999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 9.835 | 29 | 93 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.0014 | 38 | 99 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.57E-6 | 44 | 94 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.8E-6 | 45 | 93 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 9.11E-17 | 128 | 184 | No hit | No description |
SuperFamily | SSF54171 | 6.41E-14 | 128 | 185 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-12 | 129 | 184 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.2E-17 | 129 | 190 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 14.855 | 129 | 184 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence Send to blast |
MEHISSNSRS SRQLTEPIHS AFPDFGTKKD FGILEESIFR IKDKETYVAH VYDNGHLPKT 60 GRTSRFDQEE NAARAHDLVS LKFWGTSAQT NFPIIDYEKA LEAMENLTDQ DVVVAVRRSS 120 SSFSRGKSKY RGVVRHANSG KWQARKGPGK DSFLGTFESE EEAAIAFDIA SIKLKGFKAI 180 TNFDLNSYNV KAILQGETEQ KDKETEKMVN LTAKFAASNI TRRQESSGIG NRKKKRSLSF 240 HNFIDKQTET GFSGNANTLS ETPVISSAGS GSQHGALVPF LSEIASLELE FPREHNGSLA 300 MGFQHSNSSA FQSYKQMEPR QTSILQEADT LLPEFELWSS NLYPPYMSQL FKEQELKGLG 360 SGFQHASSSC FKPFRQTS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010111443.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024031169.1 | 0.0 | AP2-like ethylene-responsive transcription factor PLT1 | ||||
TrEMBL | W9S848 | 0.0 | W9S848_9ROSA; AP2-like ethylene-responsive transcription factor PLT2 | ||||
STRING | XP_010111443.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF38881 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 4e-42 | AP2 family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 21410701 |