PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107742.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 275aa    MW: 31373.8 Da    PI: 7.1313
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107742.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-1980128355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_010107742.1  80 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 128
                     9*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.03E-2279137IPR016177DNA-binding domain
PROSITE profilePS5103223.77579136IPR001471AP2/ERF domain
SMARTSM003803.1E-3979142IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-3279137IPR001471AP2/ERF domain
PRINTSPR003676.7E-128091IPR001471AP2/ERF domain
CDDcd000185.76E-3380137No hitNo description
PfamPF008475.3E-1280128IPR001471AP2/ERF domain
PRINTSPR003676.7E-12102118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0034059Biological Processresponse to anoxia
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MCGGAVIAGL IPRNRGRRVN SSDIWPSSPF AKLSHNSFES NFCHLINHEV ENHVPLKRSV  60
PSSEGEQSEK PVKRVRKNLY RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD  120
REARKIRGKK AKVNFPNEDT NDTYGAVQVQ QAHRNQTRPL YQPHNTQEFG LGYDLNQIEQ  180
TFPNSNTNCF GTAQTRVKEE EPRKEEKVVN LVGEEEINEL QKLSEELMAY ENYMKFYQIP  240
YLDGQSAAPS TAQESEVGEL WSFDGDDVRS SGSDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-2280136360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A9e-22801381574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107742.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107742.10.0ethylene-responsive transcription factor ERF071
TrEMBLW9S5U50.0W9S5U5_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010107742.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67713449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.15e-37ERF family protein