PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010102245.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 289aa    MW: 32610 Da    PI: 4.9473
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010102245.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-19134183355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+  ++g
  XP_010102245.1 134 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEEAALAYDQAAFLMRG 183
                     9*******.**********44465..**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541716.47E-23133192IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-30133192IPR001471AP2/ERF domain
PfamPF008471.7E-13133183IPR001471AP2/ERF domain
SMARTSM003802.4E-38133197IPR001471AP2/ERF domain
PROSITE profilePS5103222.866133191IPR001471AP2/ERF domain
PRINTSPR003673.6E-11134145IPR001471AP2/ERF domain
CDDcd000182.08E-31134192No hitNo description
PRINTSPR003673.6E-11157173IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MDYYQQYSSL YIPSCPDYYN YSDQSSNSFN SSSLDQSLSW SHNDNNMFNV YDDSHQSSVN  60
PNPHPLPFNV NDTEEMLLYG VLAEAGTDGD HRSPISSSNS NNNNIKAVVV DQEEVNSRAA  120
PEDEEEKEND GTAYRGVRKR PWGKYAAEIR DSTRNGVRVW LGTFDTAEEA ALAYDQAAFL  180
MRGSLAVLNF PAEKVCQSLR EMKYTFHEGC SPVLALKKRH SLKRKSANST KKKDQIMIKN  240
NIKSTNHVIN TNHAVNIANE IVVMKNVVVL EDLGADYLEE LLSISEQQY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-29131191363ATERF1
3gcc_A2e-29131191363ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010102245.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010102245.10.0ethylene-responsive transcription factor 1B
TrEMBLW9S6S50.0W9S6S5_9ROSA; Ethylene-responsive transcription factor 1B
STRINGXP_010102245.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31133199
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-53ethylene response factor 1