PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096871.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 585aa    MW: 63593.5 Da    PI: 6.5093
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096871.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.51.8e-30328386259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+
  XP_010096871.1 328 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDQTILTTTYEGHHNHP 386
                     7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.3E-34312388IPR003657WRKY domain
SuperFamilySSF1182901.05E-27320388IPR003657WRKY domain
PROSITE profilePS5081129.574322388IPR003657WRKY domain
SMARTSM007742.1E-37327387IPR003657WRKY domain
PfamPF031062.0E-26329386IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    Send to blast
MDPTRELDQL GSPVIRGVDG RKRVVGELDF FANKTVDHLV KATSHGHIVD GGDDDDKVED  60
QDRSERDHGV LQEMQLDVNT GLCLLTTNTS SEKSSVDEGS SGNNLEDNKK PALNELAVLQ  120
AELGRMNNEN QRLRGLLSQV NNDYQILNMH VASLMQKQNS QNSETAEERN KMMSRLLEEN  180
QKSLIVTKAR QFMDIGEPQI TGEKDYEVSQ SSLDQGRSQN RNSRSSNHQQ NEIVESILEC  240
KSNIINSADF SKELSAHHRH DDREEGTDQE QLGAGASPGS RWVPNKVARF GNSRYHDQDQ  300
ATSSAETMSM IRKARVSVRA RSEASMLSDG CQWRKYGQKM AKGNPCPRAY YRCTMATGCP  360
VRKQVQRCAE DQTILTTTYE GHHNHPLPPT AMAMASTTSA AASMLLSGSM PSADHHSLFN  420
PNFLARTAHP CSPSFATLSA SAPFPTVTLD LTRTPTTTSS SSSAEQILGQ LRQLSQGNFH  480
NLSQILPQNV MSSSSSQLFG HGLADQCSKL VGLHGLNNGA ANNPLDIAPA GHLQADTVSV  540
ATAAITSDPN FTAALVAAIT NIIGGNVKPI NTSSVTTKNN SEKNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-22314389175WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096871.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010096871.10.0probable WRKY transcription factor 31
TrEMBLW9R2W50.0W9R2W5_9ROSA; WRKY transcription factor 6
STRINGXP_010096871.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.14e-80WRKY family protein