PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010094437.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 245aa    MW: 27725.3 Da    PI: 6.5476
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010094437.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20100150155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp   ++rkr++lg+f+taeeAa  +++a+ kl+g
  XP_010094437.1 100 KKFRGVRRRP-WGRWAAEIRDP---NRRKRVWLGTFDTAEEAATVYDRAAVKLKG 150
                     59********.**********8...335************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381238.7E-656245IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000183.76E-33100158No hitNo description
Gene3DG3DSA:3.30.730.108.1E-31101159IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-23101159IPR016177DNA-binding domain
PfamPF008471.8E-13101150IPR001471AP2/ERF domain
PROSITE profilePS5103224.605101158IPR001471AP2/ERF domain
SMARTSM003801.7E-35101164IPR001471AP2/ERF domain
PRINTSPR003671.6E-10102113IPR001471AP2/ERF domain
PRINTSPR003671.6E-10124140IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MISHERILDR EIKYSEHKTT TRKPMAGAQQ KLIRIIITDA DATDSSSDDE SEPSVLRVVK  60
RHIKEINFEK SSPDPNKPPK QVKALKRHLK SPEPDAARRK KFRGVRRRPW GRWAAEIRDP  120
NRRKRVWLGT FDTAEEAATV YDRAAVKLKG ANAVTNFPKA VMTETTADVT ETSSDLSDVA  180
ASSPTSVLRF DEPTPFEPFG FLDYDVFGFD SDIDGTLGLL PDIMVSRKTL EEVEFSEFDL  240
VDVVF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2096158972Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197107RRKKFRGVRRR
2105124RRRPWGRWAAEIRDPNRRKR
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates the defense genes of plants. {ECO:0000269|PubMed:11971137}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010094437.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010094437.11e-178pathogenesis-related genes transcriptional activator PTI6
SwissprotO046823e-51PTI6_SOLLC; Pathogenesis-related genes transcriptional activator PTI6
TrEMBLW9R6S91e-177W9R6S9_9ROSA; Pathogenesis-related protein transcriptional activator PTI6
STRINGXP_010094437.11e-177(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-27cytokinin response factor 4