PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010092573.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 361aa    MW: 38814.6 Da    PI: 6.7888
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010092573.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30177235259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp ++++tY+ eHnh+
  XP_010092573.1 177 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPGMFIVTYTAEHNHP 235
                     79*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-30167237IPR003657WRKY domain
PROSITE profilePS5081134.842171237IPR003657WRKY domain
SuperFamilySSF1182905.49E-26174237IPR003657WRKY domain
SMARTSM007741.5E-36176236IPR003657WRKY domain
PfamPF031062.5E-25178235IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010150Biological Processleaf senescence
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MDDDWGLQAV VRGCSSVSTG AAAATSTATT TTTTTTISFM ADFQPNNNTN NNSFFFSPVF  60
GSNNMITQRQ SSSQVFAPPD PMRVRNHVAA MEEELHELYK PFFPKSQTNI TPNIISVSSS  120
LNSSNDQRVI VQTKQNNINQ STKQSHGAST SSTTPRSKKR KNQLKKVCQV PAESLSSDIW  180
AWRKYGQKPI KGSPYPRGYY RCSSSKGCLA RKQVERNRSD PGMFIVTYTA EHNHPAPTHR  240
NSLAGSTRQK PSSAAAGDAG KSTPITKPSS PATSAEEDLA AAQAQSTTTE SKEGPESSTV  300
LMDDEEEDEF GFSDVAVSDD FFVGLEGLGT PATGDFFSDN FPSSFGLPWV ANSAATAAGS  360
I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B8e-23161238280Disease resistance protein RRS1
5w3x_D8e-23161238280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00422DAPTransfer from AT4G01250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010092573.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2297632e-91KP229763.1 UNVERIFIED: Boehmeria nivea WRKY transcription factor-like (WRKY34) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010092573.10.0WRKY transcription factor 22
TrEMBLW9QR850.0W9QR85_9ROSA; WRKY transcription factor 22
STRINGXP_010092573.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42053259
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.19e-74WRKY family protein