PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010090062.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 570aa    MW: 64432.8 Da    PI: 8.1652
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010090062.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-10379423554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h + Er+RR+++N++f+ Lr llP+      +K +Ka+ L  + eY+  L
  XP_010090062.1 379 HMISERKRREKLNESFHGLRALLPPG-----TKKDKASLLNTTREYLIAL 423
                     8899********************97.....7**************8665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.31E-10372428No hitNo description
SuperFamilySSF474594.32E-16374444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.278374423IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-13378441IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-7379423IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.1E-12380429IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MSLFLDLDQT GRSNFLRALS QSLGCTYVCF WIYIRNPANC SYIGFGSCLK YLDGLFLEEE  60
VINTQLPSSS SGSYARRLFD EYRQSTFSVA ANNDHVPGFA FKHSFPYLEL QELDLRRLTS  120
NDTQRQFYQE ARIKTAVFMG CKIGELELGL PNVPQINMKM ELKSWFPEEF PTTQSQLVEL  180
INPRRPLITE QNPPTSSSSS LRSFSIDSSP EYSSLLFNIP PTNTNTCQNI PEILSHPDVN  240
INPPPIQQPI MPHHQEMQSF ARLRNIQFPN LETEAAAMTK AILAVLTSPS PPASSSSSPH  300
QPSHTSSTYN HDPHHLINPK SSAFKSYTNS SLLASQLARD LGSKKTVFKR SISFYRGLNF  360
MRNHQRLQVT RPSSTQLHHM ISERKRREKL NESFHGLRAL LPPGTKKDKA SLLNTTREYL  420
IALKAQVEEL SRRNKQLEAQ VFPSSTAGAV NNEEATIINE SSSSDNHERL QDVRLRHVSG  480
STSEEAEIVD LHVTLRAAIP AEDLVLRILE FLRRDQKNVS MISMEANSRL TESSAFINRV  540
TFRLRVLEGS EWDGSAFQEA VRRVVADLAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1382387ERKRRE
2383388RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010090062.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010090062.20.0putative transcription factor bHLH041 isoform X1
TrEMBLW9QUP10.0W9QUP1_9ROSA; Uncharacterized protein
STRINGXP_010090062.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.14e-63bHLH family protein