![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009780578.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
LFY |
Protein Properties |
Length: 417aa MW: 46226.1 Da PI: 6.854 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009780578.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Nsy&pid=XP_009780578.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 642 | 9e-196 | 1 | 396 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseap.........leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeel 86
mdpeafsaslfkwdpr a+ +pp+rlle a+++++p l+aa ++++r+l +leelf+ayG+ry+t+akiaelGftv+tL+dmkdeel
XP_009780578.1 1 MDPEAFSASLFKWDPRGAM-PPPTRLLEAAVAPPPPppalpppqpLSAAYSIKTRELGGLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEEL 94
9**************9877.77778888887777666777665444555555556666************************************* PP
FLO_LFY 87 ddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeg.lseepvqe.ekeaagsggeglgeaelvaaee. 178
dd+m+sls+ifr++llvGeryGikaa+raerrrleeee ++r +lls+ ++aldalsqe+ lseepvq+ e+ea+gsgg+g +++e+vaa+
XP_009780578.1 95 DDMMNSLSQIFRWELLVGERYGIKAAIRAERRRLEEEE-LRRRGHLLSDGGTNALDALSQEVgLSEEPVQQqEREAVGSGGGG-TTWEVVAAAGg 187
************************************88.8888899999999*********55******99455677777766.89999988775 PP
FLO_LFY 179 kkseeekkkaskkkqkrkkk.kelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiake 272
+++++++k+ + ++k+ +++++e+++e +e+d + ++++ + +erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iake
XP_009780578.1 188 GRMKQRRRKKVVAAGREKRGgASAEEDEETEEGQEDDWNINDASGGISERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKE 282
444444444433333333330332333333333334444444555556*********************************************** PP
FLO_LFY 273 rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsi 367
rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdid++fnahprL+i
XP_009780578.1 283 RGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDTIFNAHPRLAI 377
*********************************************************************************************** PP
FLO_LFY 368 WYvPtkLrqLChlerskas 386
WYvPtkLrqLCh ers+a+
XP_009780578.1 378 WYVPTKLRQLCHSERSNAA 396
****************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MDPEAFSASL FKWDPRGAMP PPTRLLEAAV APPPPPPALP PPQPLSAAYS IKTRELGGLE 60 ELFQAYGIRY YTAAKIAELG FTVNTLLDMK DEELDDMMNS LSQIFRWELL VGERYGIKAA 120 IRAERRRLEE EELRRRGHLL SDGGTNALDA LSQEVGLSEE PVQQQEREAV GSGGGGTTWE 180 VVAAAGGGRM KQRRRKKVVA AGREKRGGAS AEEDEETEEG QEDDWNINDA SGGISERQRE 240 HPFIVTEPGE VARGKKNGLD YLFHLYEQCR DFLIQVQNIA KERGEKCPTK VTNQVFRYAK 300 KAGASYINKP KMRHYVHCYA LHCLDEEASN ALRRAFKERG ENVGAWRQAC YKPLVAIAAR 360 QGWDIDTIFN AHPRLAIWYV PTKLRQLCHS ERSNAAAAAA SSSVSGGGGG GDHLPHF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that act to specify determinacy in the progenitor cells for both flowers and leaves. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JQ686928 | 0.0 | JQ686928.1 Nicotiana tabacum cultivar SR1 LEAFY/FLORICAULA (LFY) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-143 | floral meristem identity control protein LEAFY (LFY) |