 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009626933.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WOX |
| Protein Properties |
Length: 197aa MW: 22846.3 Da PI: 9.7157 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009626933.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.8 | 4.3e-19 | 3 | 63 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+++t++ql +L++l++k r+p+ ++ ++++++l +++ ++V++WFqN++a++++
XP_009626933.1 3 RPRWSPTPQQLMILQDLYRKgLRNPTSSQVQKITAHLslfgKIQCKNVFYWFQNHKARDRQ 63
89*****************99*************************************996 PP
|
| 2 | Wus_type_Homeobox | 107 | 1.1e-34 | 2 | 64 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+r+RW+Ptp+Q++iL++ly++Glr+P+++++q+ita+L+ +Gki+ kNVfyWFQN+kaR+rqk
XP_009626933.1 2 PRPRWSPTPQQLMILQDLYRKGLRNPTSSQVQKITAHLSLFGKIQCKNVFYWFQNHKARDRQK 64
579***********************************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 197 aa
Download sequence Send
to blast |
MPRPRWSPTP QQLMILQDLY RKGLRNPTSS QVQKITAHLS LFGKIQCKNV FYWFQNHKAR 60
DRQKLRKQLL HQMEKTPTED NDNQLPLLIN NTNTNDVVHF VENYPSFPPN VHTFYPHSPT 120
ILLHQTEGKE TSSAQMMNNV GKVDLRLTEN DMMKMNVQGW VLMMTENMGQ NSIPCCSNVK 180
PIETLQLFPV KATGVKE
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975450 | 6e-65 | HG975450.1 Solanum pennellii chromosome ch11, complete genome. |
| GenBank | HG975523 | 6e-65 | HG975523.1 Solanum lycopersicum chromosome ch11, complete genome. |
