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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009614004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
LFY |
Protein Properties |
Length: 413aa MW: 46225.1 Da PI: 7.0522 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009614004.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 647.6 | 1.7e-197 | 1 | 395 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseap.........leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeel 86
mdpeafsaslfkwdpr a+ +pp+rlle a+++++p l+aa ++ +r+l +leelf+ayG+ry+t+akiaelGftv+tL+dmkdeel
XP_009614004.1 1 MDPEAFSASLFKWDPRGAM-PPPTRLLEAAVAPPPPppalpppqpLSAAYSIRTRELGGLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEEL 94
9**************9877.77778888887777666777554434444444455566************************************* PP
FLO_LFY 87 ddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqe.ekeaagsggeglgeaelvaaee.. 178
dd+m+sls+ifr++llvGeryGikaa+raerrrleeee ++r +lls+ ++aldalsqeglseepvq+ e+ea+gsgg+g +++e+vaa
XP_009614004.1 95 DDMMNSLSQIFRWELLVGERYGIKAAIRAERRRLEEEE-LRRRGHLLSDGGTNALDALSQEGLSEEPVQQqEREAVGSGGGG-TTWEVVAAVGgg 187
************************************88.8888899999999****************99456677777776.888888776543 PP
FLO_LFY 179 kkseeekkkaskk.kqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiake 272
+ +++++kk ++ +++r + +++++e+++e +e++ + +++g + +erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iake
XP_009614004.1 188 RMKQRRRKKVVSTgRERRGR-ASAEEDEETEEGQEDEWNINDAGGGISERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKE 281
44444444444442333333.333444555555555566667777778*********************************************** PP
FLO_LFY 273 rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsi 367
rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdid++fnahprL+i
XP_009614004.1 282 RGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDTIFNAHPRLAI 376
*********************************************************************************************** PP
FLO_LFY 368 WYvPtkLrqLChlerskas 386
WYvPt+LrqLCh ers+a+
XP_009614004.1 377 WYVPTRLRQLCHSERSNAA 395
****************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MDPEAFSASL FKWDPRGAMP PPTRLLEAAV APPPPPPALP PPQPLSAAYS IRTRELGGLE 60 ELFQAYGIRY YTAAKIAELG FTVNTLLDMK DEELDDMMNS LSQIFRWELL VGERYGIKAA 120 IRAERRRLEE EELRRRGHLL SDGGTNALDA LSQEGLSEEP VQQQEREAVG SGGGGTTWEV 180 VAAVGGGRMK QRRRKKVVST GRERRGRASA EEDEETEEGQ EDEWNINDAG GGISERQREH 240 PFIVTEPGEV ARGKKNGLDY LFHLYEQCRD FLIQVQNIAK ERGEKCPTKV TNQVFRYAKK 300 AGASYINKPK MRHYVHCYAL HCLDEEASNA LRRAFKERGE NVGAWRQACY KPLVAIAARQ 360 GWDIDTIFNA HPRLAIWYVP TRLRQLCHSE RSNAAAAASS SVSGGVGDHL PHF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that act to specify determinacy in the progenitor cells for both flowers and leaves. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JQ686928 | 0.0 | JQ686928.1 Nicotiana tabacum cultivar SR1 LEAFY/FLORICAULA (LFY) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-146 | floral meristem identity control protein LEAFY (LFY) |