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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009606363.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
HSF |
| Protein Properties |
Length: 351aa MW: 40611.8 Da PI: 5.8497 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009606363.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 108.9 | 3.8e-34 | 58 | 150 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96
Flkk++e+++d++++++isws++++sfvv+d+++f+ ++Lpk+Fkh+nf+SF+RQLn+Y F+k+++++ weF+++ F+kgkk+ll +
XP_009606363.1 58 FLKKTFEMVDDPNTDSIISWSNTKTSFVVWDPHKFSIDLLPKHFKHNNFSSFIRQLNTYRFRKIDSDR---------WEFANEGFQKGKKHLLVN 143
9********************999*****************************************999.........****************** PP
XXXXXXX CS
HSF_DNA-bind 97 ikrkkse 103
ikr+k++
XP_009606363.1 144 IKRRKQQ 150
****986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MEQEKMVTDE VINGGLLTVK EEPVLFLDEE DIIGNSEFSS SLLPKPLEGL RDVGPPPFLK 60
KTFEMVDDPN TDSIISWSNT KTSFVVWDPH KFSIDLLPKH FKHNNFSSFI RQLNTYRFRK 120
IDSDRWEFAN EGFQKGKKHL LVNIKRRKQQ YTHQGLGSGS AQSWLGSCNK DGVEAELEKL 180
RKDQNTLKME IHSLKQQQEN TESYLATVKE RLQNSETRQK YMVIFMAKAF KNPLFVQHLI 240
EKIKQRKTLD NGTVTKKRRL ANTPCDNKCD GHSLQVQEEF TTIKSEIQTL FSSDESNSPA 300
NEQKMNGQDM SSENYILWEK LMEDDMIYEN GAENDKHHSD IVLELEDLIA S
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