PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009595757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 189aa MW: 21486.9 Da PI: 10.5484 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 69.3 | 6.3e-22 | 55 | 103 | 5 | 54 |
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt eLH++F+eav+qL G+ + Pk+ilelm+v+gLt+ +v+SHLQk R XP_009595757.1 55 EWTLELHAKFLEAVAQL-GEGRCYPKEILELMDVPGLTRMQVASHLQKCR 103 7****************.9*****************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.525 | 45 | 107 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 8.96E-16 | 50 | 103 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.0E-21 | 51 | 104 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-18 | 54 | 104 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.1E-7 | 55 | 102 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence Send to blast |
MGNDEEQNNN HEVVNSESNG KYKLRKKRGR KSTKEVNQGD SHSSGKSVKR KVCTEWTLEL 60 HAKFLEAVAQ LGEGRCYPKE ILELMDVPGL TRMQVASHLQ KCRNDNWRAP EKRKSSRNSS 120 GQGSSSGSQQ RSGHRKFGSM PRIQTNIVTN LQQQQLDQEI NQRSPPEFQL NSSNIIARRQ 180 SSTQQEQPI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009595754.2 | 1e-132 | PREDICTED: two-component response regulator ORR21-like | ||||
TrEMBL | A0A1S3Z9M6 | 1e-128 | A0A1S3Z9M6_TOBAC; two-component response regulator ORR21-like | ||||
STRING | XP_009595757.1 | 1e-137 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA813 | 23 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 2e-16 | response regulator 2 |