PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009589173.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Nin-like

Protein Properties

Length: 841aa MW: 95206.7 Da PI: 5.5678

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009589173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	50	6e-16	652	696	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is ++l+++F +++ dAAk+Lgv ++LKr CR y I RWP+ k XP_009589173.1 652 GISRSVLEEQFGKKLSDAAKSLGVARSTLKRMCRDYDIYRWPRSK 696 6999**************************************865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.843	637	722	IPR003035	RWP-RK domain
Gene3D	G3DSA:1.10.10.60	2.7E-4	638	688	IPR009057	Homeodomain-like
Pfam	PF02042	4.3E-13	653	696	IPR003035	RWP-RK domain
SuperFamily	SSF54277	7.2E-17	754	839	No hit	No description
PROSITE profile	PS51745	18.234	757	841	IPR000270	PB1 domain
SMART	SM00666	2.4E-15	757	840	IPR000270	PB1 domain
Pfam	PF00564	7.8E-15	758	839	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	3.8E-15	759	838	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 841 aa Download sequence Send to blast
MPIELKFSYR KRGDGINRWV FWTQHNGDEL NQVKSLFPVL RGYEFEPWKQ PPVEMQGDST 60 QPDTNGDSQL NRLTIKNLVE LLDVQGTCLI QFWAPIRINS GKTFLTTADQ PFAFNGKIHE 120 GLWAYRRVSL LTIASVDSTE IDETKRVHVH GRPARVFRSG MPEFSPHVRY YYMDEYPLRN 180 FAMCLGVGSY WTLPVFESSG DRCIGVLEYA FEANVGLDLY STLDCLINNH RILKTMGLAL 240 IPSWLACSQE IQEVWEQELA KVKEALEVTC KTHRLLFAQT WISVLDSSRT QMLITSPPTK 300 YWSEEITSLE FLAVSDLHHV RIGQGLVGKV LSSKGSCFCR DITQLSIDFY PFVPIARCAG 360 FTACFAIFVR LNSACHMVLE FFLPNDETLD RNPQSFLSKL LATIREQLPS FFLDSGPSLF 420 VEVIRTAPVD ELDSFEISQL QQGVRSKGNE KMVLFDSLNQ DSADLGPSSS TDIGAHHMEI 480 AKDTPDNGEE TVLPDSAHKQ GVEEADAMDK EKSSVDFILA TSFAVSEKKL QQNLSTDKAS 540 LDEKLDSFEI GHRQLPSMVQ YDTINQIFGF DPSSSSDLEE IITADYGRDT QLNLQSKKRG 600 ESTQPDLAHQ QRVEEADVGD KRRHSVHVEE NANSHNCPEK HKRIKRIEKE YGISRSVLEE 660 QFGKKLSDAA KSLGVARSTL KRMCRDYDIY RWPRSKSAND VCSLSENKPV KRVENQTGNS 720 SREDLQLPHA GLSNGMDTTT TLTQRKKPTA TFQSDNAMSV KVTYKDVTIR FPFSLSSGKI 780 DLETEVEKRL KLVLIGSYSI KYEDEDNDWI AITCDSDLEY GMHTLRSLGR TTMKMLVEPL 840 N

Sequence ? help Back to Top

Protein Sequence Length: 841 aa Download sequence Send to blast

MPIELKFSYR KRGDGINRWV FWTQHNGDEL NQVKSLFPVL RGYEFEPWKQ PPVEMQGDST  60
QPDTNGDSQL NRLTIKNLVE LLDVQGTCLI QFWAPIRINS GKTFLTTADQ PFAFNGKIHE  120
GLWAYRRVSL LTIASVDSTE IDETKRVHVH GRPARVFRSG MPEFSPHVRY YYMDEYPLRN  180
FAMCLGVGSY WTLPVFESSG DRCIGVLEYA FEANVGLDLY STLDCLINNH RILKTMGLAL  240
IPSWLACSQE IQEVWEQELA KVKEALEVTC KTHRLLFAQT WISVLDSSRT QMLITSPPTK  300
YWSEEITSLE FLAVSDLHHV RIGQGLVGKV LSSKGSCFCR DITQLSIDFY PFVPIARCAG  360
FTACFAIFVR LNSACHMVLE FFLPNDETLD RNPQSFLSKL LATIREQLPS FFLDSGPSLF  420
VEVIRTAPVD ELDSFEISQL QQGVRSKGNE KMVLFDSLNQ DSADLGPSSS TDIGAHHMEI  480
AKDTPDNGEE TVLPDSAHKQ GVEEADAMDK EKSSVDFILA TSFAVSEKKL QQNLSTDKAS  540
LDEKLDSFEI GHRQLPSMVQ YDTINQIFGF DPSSSSDLEE IITADYGRDT QLNLQSKKRG  600
ESTQPDLAHQ QRVEEADVGD KRRHSVHVEE NANSHNCPEK HKRIKRIEKE YGISRSVLEE  660
QFGKKLSDAA KSLGVARSTL KRMCRDYDIY RWPRSKSAND VCSLSENKPV KRVENQTGNS  720
SREDLQLPHA GLSNGMDTTT TLTQRKKPTA TFQSDNAMSV KVTYKDVTIR FPFSLSSGKI  780
DLETEVEKRL KLVLIGSYSI KYEDEDNDWI AITCDSDLEY GMHTLRSLGR TTMKMLVEPL  840
N

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009589173.1	0.0	PREDICTED: protein NLP7-like isoform X1
TrEMBL	A0A1U7WUY0	0.0	A0A1U7WUY0_NICSY; protein NLP7-like isoform X4
STRING	XP_009589173.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13981	7	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	3e-41	NIN like protein 7