PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004512872.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 145aa    MW: 16651.8 Da    PI: 9.8048
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004512872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.41e-143584154
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54
                    s+y+GVr++k +gr+ +eIrd +     +kr +lg+f+t+e+Aa  + + + ++e
  XP_004512872.1 35 SKYRGVRRRK-WGRYSCEIRDpF----LKKREWLGTFDTEEQAALVYKKKKDEFE 84
                    89*****998.**********44....25**********9999999988877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.1E-83576IPR001471AP2/ERF domain
CDDcd000181.27E-193598No hitNo description
SuperFamilySSF541719.15E-163590IPR016177DNA-binding domain
SMARTSM003802.3E-153699IPR001471AP2/ERF domain
PROSITE profilePS5103218.613696IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-203691IPR001471AP2/ERF domain
PRINTSPR003671.5E-83748IPR001471AP2/ERF domain
PRINTSPR003671.5E-85975IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MPTVKRVTKE ILIPKLESSS KLYMKEGNRK TVSTSKYRGV RRRKWGRYSC EIRDPFLKKR  60
EWLGTFDTEE QAALVYKKKK DEFEKRKALL HLKNFKQDDF EIDLNCKAQG KGCGGGNNFD  120
DSSDDDDNVG GGSSHHNIMD VQGNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15779KKREWLGTFDTEEQAALVYKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004512872.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027193434.14e-65ethylene-responsive transcription factor CRF6-like
TrEMBLA0A3Q7XI669e-64A0A3Q7XI66_CICAR; ethylene-responsive transcription factor CRF6-like
STRINGXP_004512872.11e-104(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.12e-18ERF family protein