PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510715.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 418aa    MW: 45132.9 Da    PI: 8.427
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_166.44.9e-21273335163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkrerrkq+NRe+ArrsR+RK+ae eeL++kv++L aeN +Lk e+++l ++++klk+e+
  XP_004510715.1 273 ERELKRERRKQSNRESARRSRLRKQAEAEELARKVDTLIAENLSLKAEMNQLAENSEKLKMEN 335
                     89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.9E-33199IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.8E-19132256No hitNo description
Gene3DG3DSA:1.20.5.1709.7E-15267332No hitNo description
SMARTSM003385.6E-18273337IPR004827Basic-leucine zipper domain
PfamPF001705.3E-19273335IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.886275338IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-10276332No hitNo description
CDDcd147023.50E-18278326No hitNo description
PROSITE patternPS000360280295IPR004827Basic-leucine zipper domain
SuperFamilySSF1604597.72E-5320386No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MGNSEDGKSV KTEKPFSPVT TDQTNQANQP NIHVYPDWAA MQAYYGQRVN VPPYFNSAVA  60
SGHAPHPYMW GPPQAMMPPY GQSYATFYSH GGVYTHPAVA IGPNSHGQGI PSSPAAGTLS  120
IETPTKSSGN TDQGLMKKLK GFDGLAMSIG NSNAERGAEN RLSQSVDTEG SSDGSDGNTT  180
GTNGTRKRSH DRTPTTTDGE GKTEMQNSPV CKETTASKKM VSATPAGVAE KFVRPVVSSG  240
MTTALELRNA ATVSVSAPQP CGVIPPEAWI QNERELKRER RKQSNRESAR RSRLRKQAEA  300
EELARKVDTL IAENLSLKAE MNQLAENSEK LKMENATLKE KLKNTQLGQT EEIILNSIDK  360
RATPVSTENL LSRVNNSNSN DRTAEEDNGY CESNKPNSGT KLHQLLDTNP RANAVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1289295RRSRLRK
2289296RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004510715.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510715.10.0common plant regulatory factor 1-like
SwissprotQ990891e-132CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A1S2YVU50.0A0A1S2YVU5_CICAR; common plant regulatory factor 1-like
STRINGXP_004510714.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-103G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]