PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027563-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 635aa    MW: 68603.9 Da    PI: 6.3285
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027563-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.71.6e-30347405259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  WALNUT_00027563-RA 347 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAnGCPVRKQVQRCAEDRTILITTYEGNHNHP 405
                         7***************************999***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-33331407IPR003657WRKY domain
SuperFamilySSF1182901.44E-27339407IPR003657WRKY domain
PROSITE profilePS5081129.677341407IPR003657WRKY domain
SMARTSM007742.0E-36346406IPR003657WRKY domain
PfamPF031061.1E-26348405IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 635 aa     Download sequence    Send to blast
MAKGSGLSID SDPIGFFLNQ PIVLNSFPED DNNHHYHNRN IKWKLGAMDA TLNRSAPPTI  60
QFPLNLNCSH RQDSPPPSDG KRTVMDEMDF FAEKHGHDNE AASTDVDRKD SDGPTALEFN  120
VNTGLNLLTT NTSSDQSMVD DGISPNVEDK RARSGELAVL QAELERMNSE NHRLKETLNQ  180
VTTTYNALQM HFATLMQAQK AKTTEENGMV DGKVEVKNNG TLVVPRQFMD LRLATNGDAD  240
ENSLSSSEGN GRDRSGSPAI KGEVMGSKQQ FGLGKDGNSD EVLAFDQDKK EHGSKIGRED  300
SPDQTSQGWG PNKVPRFNSP KDVDQTEATM RKARVSVRAR SEAPMITDGC QWRKYGQKMA  360
KGNPCPRAYY RCTMANGCPV RKQVQRCAED RTILITTYEG NHNHPLPPNA MAMASTTSSA  420
ARMLLSGSMS SADGLMNSNF LTRTLLPCSP SMATISASAP FPTVTLDLTQ SPNPFQLPRP  480
PTQFQIPFPN PSQTQNLATA QATLLPQIFG QALYNNQSKF SGLQMSQDMD SALQLGHQPQ  540
ALAMNQGQHN SLSDTVSAAT AAITADPNFT AALAAAITSI IGGAAQTNNI SNNNNSNNNA  600
NITTTTTSNG NLTSTTSNSN SNGNNKISNS SLQGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-22333408175WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00428DAPTransfer from AT4G04450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018811738.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9XEC31e-139WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2I4DX560.0A0A2I4DX56_JUGRE; probable WRKY transcription factor 31
STRINGEOX932430.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-121WRKY family protein