PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Basic Information? help Back to Top

TF ID

Vun008580

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

NAC

Protein Properties

Length: 263aa MW: 29004.4 Da PI: 4.9461

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45787583	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62.7	1.2e-19	2	55	77	128
NAM 77 atksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 atk+gyWkatgkd++v+++ ++++g +ktLvfy grap g +tdWvmheyrl Vun008580 2 ATKAGYWKATGKDRKVVCQsnPSNVTGYRKTLVFYAGRAPLGDRTDWVMHEYRL 55 699************98666778*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	27.897	1	78	IPR003441	NAC domain
Pfam	PF02365	1.3E-9	2	55	IPR003441	NAC domain
SuperFamily	SSF101941	1.44E-23	2	78	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence Send to blast
XATKAGYWKA TGKDRKVVCQ SNPSNVTGYR KTLVFYAGRA PLGDRTDWVM HEYRLCDDLG 60 QPTPSFQGGF ALCRVIKKNE KASATKGENK GKRAGSSSIN GSDTSVRFSG EPFSNSGDSS 120 SHASQLNNES RYSSPITSPY NVAPMGEINQ ASLETNPSNF WISPDMILDS SKDYPQLQHA 180 VAEYFPRYDL PSMGTQWQSV EHSETPSGFS YSNVNGEVEF ADTLSQIGGM SPYSREWNSM 240 DFYGNGGDVP YEDYDQINSI SYP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	6e-13	5	82	95	169	NO APICAL MERISTEM PROTEIN
1ut4_B	6e-13	5	82	95	169	NO APICAL MERISTEM PROTEIN
1ut7_A	6e-13	5	82	95	169	NO APICAL MERISTEM PROTEIN
1ut7_B	6e-13	5	82	95	169	NO APICAL MERISTEM PROTEIN
3swm_A	7e-13	5	82	98	172	NAC domain-containing protein 19
3swm_B	7e-13	5	82	98	172	NAC domain-containing protein 19
3swm_C	7e-13	5	82	98	172	NAC domain-containing protein 19
3swm_D	7e-13	5	82	98	172	NAC domain-containing protein 19
3swp_A	7e-13	5	82	98	172	NAC domain-containing protein 19
3swp_B	7e-13	5	82	98	172	NAC domain-containing protein 19
3swp_C	7e-13	5	82	98	172	NAC domain-containing protein 19
3swp_D	7e-13	5	82	98	172	NAC domain-containing protein 19
4dul_A	6e-13	5	82	95	169	NAC domain-containing protein 19
4dul_B	6e-13	5	82	95	169	NAC domain-containing protein 19
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027920378.1	0.0	NAC domain-containing protein 71
TrEMBL	A0A4D6L0U8	0.0	A0A4D6L0U8_VIGUN; Uncharacterized protein
STRING	XP_007155764.1	1e-172	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	3e-48	NAC domain containing protein 71