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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vang11g02990.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
GRAS |
| Protein Properties |
Length: 333aa MW: 36546.4 Da PI: 9.2117 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang11g02990.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 261.4 | 3.1e-80 | 3 | 331 | 36 | 374 |
GRAS 36 dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlq 130
+p++R+a++f+ AL++ l++s + + +s + +++++ +k+fs +sPi+ fs +t+Nqa+le ++g++ vH+iDf+i+ G+Q+++L++
Vang11g02990.1 3 KPLHRAAFHFKDALHSILSGSNRAAS----NRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMK 93
799****************9444444....4444444589******************************************************* PP
GRAS 131 aLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleser 224
++a++++g+ lRiT+v+++e + e + ++e+L++fA+ lg++++ +++ +++e++++++ r+ gE++aV l+ +++ l + ++
Vang11g02990.1 94 EIAEKAAGASlLLRITAVVPEE--YAVESRLVRENLNQFAHDLGIRVQVDFVPLRTFEAVSFKAVRFVDGEKIAVLLSPAIFCRLGSVGA---SV 183
******777669********66..99999**********************9999***************************99954444...45 PP
GRAS 225 devLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklpres..eerikvErellgreivnvvacegaerrerhetlek 314
++L v+++ P vvv+v+ e ++ ++sF ++++++le+ys+++dsl+a++++ e+ + +E ll+++i +v + ++
Vang11g02990.1 184 GAFLADVRRMAPGVVVFVDGEgwTEAtAAASFRRGVVNSLEFYSMMLDSLDASVAAGGggEWVRRIEMLLLRPKIFAAVESARRR-------SPA 271
5********************553334677***********************9998888999*************999876665.......789 PP
GRAS 315 WrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
Wre++ aG++pv+ls++a qa++ll+kv+ +g++ve+++++lvl+W++r++vs+SaWr
Vang11g02990.1 272 WREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVEKRHAELVLCWHERAMVSTSAWR 331
***********************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MAKPLHRAAF HFKDALHSIL SGSNRAASNR LSSMAEIVQT IKTFKAFSGI SPIPMFSIFT 60
TNQALLETLN GSSFVHVIDF EIGLGIQYAS LMKEIAEKAA GASLLLRITA VVPEEYAVES 120
RLVRENLNQF AHDLGIRVQV DFVPLRTFEA VSFKAVRFVD GEKIAVLLSP AIFCRLGSVG 180
ASVGAFLADV RRMAPGVVVF VDGEGWTEAT AAASFRRGVV NSLEFYSMML DSLDASVAAG 240
GGGEWVRRIE MLLLRPKIFA AVESARRRSP AWREAFYGAG MRPVQLSQFA DYQAECLLAK 300
VQIRGFHVEK RHAELVLCWH ERAMVSTSAW RC*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
