PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang09g05900.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 521aa    MW: 58582.4 Da    PI: 7.867
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang09g05900.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-11336380554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h + ErrRR+++N+ f+ Lr llP+      +K +Ka+iL  A + +++L
  Vang09g05900.1 336 HMISERRRREKLNENFQALRALLPPG-----TKKDKASILIAAKDTLSYL 380
                     8899********************97.....8***********9999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.07E-15331399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.878331380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.55E-10333384No hitNo description
Gene3DG3DSA:4.10.280.104.3E-14335396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-8336380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.5E-10337386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    Send to blast
MHPMENVFSL PVAARADFIQ FLLQSFGCSY ICLWAYDSIS PNRLCFLDGI YNVRNDQPGS  60
SLGTVAQQLF RQFRTLTFDV NDDRVPGLAF RNQRPYLELQ RLELLRLAST EIQTQFFQEA  120
RIKSAVFMGC NKGEIELGFL NMSQVDIQTA LRSLFPAEFS TGQSQQIDQN PPTSSSSSLR  180
SISTGSPEYS SLLFSIPGTS QSHFPETLGG ARVSPMQPVP NTATGSHQQA IQALAQAPLT  240
QFPTPETEHD AIMRAILHVI SPTSHQHQNL PFAPVVHPDA SAFQRYRSDI GPNIASSIRK  300
QSFMKRSFAF FTNLNFMRMR ERIQATSRPT NTQLHHMISE RRRREKLNEN FQALRALLPP  360
GTKKDKASIL IAAKDTLSYL MAEVDQLSKR NQGLKSPLPS KEPTTEETKA RLSPNERLSV  420
RVSHVPESSS SQERMVDLQV NVRGQLSQID LSICLLEFLK QCLNMSLVSM DANTHIAEGN  480
NEIHQLTFRL RIIQGSDWDE CTFEEAVRRV VADSAQYKED *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1339344ERRRRE
2340345RRRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang09g05900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017421300.10.0PREDICTED: putative transcription factor bHLH041 isoform X1
TrEMBLA0A0S3RHX40.0A0A0S3RHX4_PHAAN; Uncharacterized protein
STRINGXP_007138719.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.15e-65bHLH family protein