PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 149aa MW: 17034.6 Da PI: 11.5841

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang02g09040.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.7	2.2e-12	70	110	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 ++ +r+ +NRe+ArrsR RK++ ++ L + v++L +eN++ Vang02g09040.1 70 RKRKRMTSNRESARRSRMRKQKHLDDLVTQVAQLRKENQQI 110 57899*********************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.2E-9	66	125	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.979	68	110	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.6E-10	68	111	No hit	No description
SuperFamily	SSF57959	9.38E-11	70	113	No hit	No description
Pfam	PF00170	3.2E-10	70	111	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.72E-15	71	113	No hit	No description
PROSITE pattern	PS00036	0	73	88	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence Send to blast
MAAITRHRTF PLYNRTCIKT RPAKKNPTIT NRALLGARPM ASSSGTCSGS SSLLQNSGSE 60 XDXQXVMXQR KRKRMTSNRE SARRSRMRKQ KHLDDLVTQV AQLRKENQQI LTTERDHRLE 120 SLNEIIELWL CVRRRGEDEV GIPTVPFL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	90	RKRKRMTSNRESARRSRMRKQK
2	82	89	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269\|PubMed:23461773}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang02g09040.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015034	0.0	AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017406399.1	2e-53	PREDICTED: bZIP transcription factor 11-like
Swissprot	C0Z2L5	7e-23	BZP44_ARATH; bZIP transcription factor 44
TrEMBL	A0A0L9VK41	1e-75	A0A0L9VK41_PHAAN; Uncharacterized protein
STRING	GLYMA12G04440.1	1e-31	(Glycine max)
STRING	XP_007131800.1	1e-31	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34590.1	4e-20	G-box binding factor 6

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Pedrotti L, et al. Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]