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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Vang01g10050.1 |
| Common Name | LR48_Vigan07g151400 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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| Family |
ERF |
| Protein Properties |
Length: 306aa MW: 33834.1 Da PI: 8.0264 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang01g10050.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.4 | 1.1e-20 | 135 | 184 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+g
Vang01g10050.1 135 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYRLRG 184
59******9.**********965...5*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MAATMDLYNG QPQVQSDPFR GELMEVLEPF MKNSALPSTS TSTSYSYSPS PLSLPPHPNF 60
YSDPSSSYLF QTQTLIGFEQ QPGSVLGLNH LSPFQVSQIQ AQMQAQSQTS LSLNFLGPKP 120
VAMKQVGGPP KPTKLYRGVR QRHWGKWVAE IRLPKNRTRL WLGTFDTAEE AALAYDKAAY 180
RLRGDFARLN FPNLKGSCLG EYKPLQSAVD AKLDAICQSL AEMPKQGKTE KGARASSKKS 240
KAARNPTQDP NPNLVCKAEP ERDGSVDSSP LSDLTFDVSE PQWEDASAYF NLQKFPSYEI 300
DWDSL*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
| Publications
? help Back to Top |
- Pati A,Vasquez-Robinet C,Heath LS,Grene R,Murali TM
XcisClique: analysis of regulatory bicliques.
BMC Bioinformatics, 2006. 7: p. 218
[PMID:16630346] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Iwase A, et al.
WIND1-based acquisition of regeneration competency in Arabidopsis and rapeseed.
J. Plant Res., 2015. 128(3): p. 389-97
[PMID:25810222] - Yang K, et al.
Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
[PMID:26460024] - Ikeuchi M, et al.
PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis.
Nat Plants, 2015. 1: p. 15089
[PMID:27250255] - Iwase A, et al.
WIND1 Promotes Shoot Regeneration through Transcriptional Activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis.
Plant Cell, 2017. 29(1): p. 54-69
[PMID:28011694]
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